Id Trinity | TRINITY_DN50195_c12_g1_i4 |
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Name Transcript | Ll_transcript_278458 |
Sequence | CCCCAATCATTATTCGTCATTCTCATTGGACCGTCATCTCATAACAACCCAATATCACCGCAGTAACCGCCACTGTTATCAAGGTCAATGACTTCAAAAA TGAAAAGTGCCACAACTTAATACAACTCCTTTTTCTAAGCCTTCAAATCTCTCTATACACAAAGGACTCTTTCCTCTGAATGTTTGAATGCTCTTGAGGC GCCGATGGACGAAACCGCCGTGAAATCAAAGCCTGACTGCATCAACAAGCGGACAAAAGCCTCCAGAGAATGTACCGGTGACGTCGGACGTGGCGGCGGC GATGAAGATTCCGATGATGAGGAGTGTGATGGCGAGGCTTGGAACACGCTGAGCCTGAATTTCCGGCAAGCGCAATCGGTGCTGGATCAGAACCGTGTGC TGATCGAGGAAGTGAACAAAAACCATGAGTCGAAGATTCCAGATAACATGGCGAAGAACGTTGACTTGATTCAGAAGATTAACAGTAACATTTCCAAGGT TCTTTCTATTTACTCCAATTTATCAAGCAGTTTCTCAAACAGTGTTCGTCAGCAGCGAGGTTTTGCCCCTGCAACCGCGAAGCGTAAGAATCGCGATGGA GATGGTGACGGCAATGACGAGGATGATGACAAGGTGGAGGACGTTCCGGAGCCTGTGTCATAGAAATCGGAGATGGTTGATTGAATTCATGGCTGCAGGA CTGCATCCTACATTAACCACCCACAGATATGAGGTATTTATGTTGTATTTGATTTTGGCCCACTGGACCTGGGAGGTAGATAAGGGAAAGGAGATAGGAA GGATATTGAACGTATGGTTTAGTTTGGTAGACATTAGAATATGGATAATCAGAAATTATGTGTTTTTGGTGGATTTCATGAACAAAAAAAAACATGACAA TATAGTAAAATATTTTGGTCCTAATCTAATGATTTGTGGTATGATATGATCTTCATTTTTCCTCTACAAGTAAGTTTGTTTGCCTCTTGCTAAACTTATC ATCCATCTACCCATCTTACTTTGACTTATATGAAAGTCGTATACTTCTAAAGTTTACCTTCACATTTATAGGACAGAACAATTTATGCTTAATTTGCTTT TCATCTCCAACAAAGCAAACATTGATTCTGCAAGCACAACCATCTCTGGTTTTAGGGATTTCTTGTTGTCAAGTTATTTATGATGTCAGCTTTGTCTTCA AATGTTTAATCTATTTAAGACTTAACCACTGGGTCAGTCACAATGCCATACCACAAGGCTACTCTGGTTGCTTCTCATTTATTTGGTTTGTTTAGCAAAG GGTTGACAACCAAATTAGCTTATCTGATCTAACAATAAAATATTTTAACAATTTCCTGGAAGGCATTAGCATATAAAATACTGCATTTACTATCGAGTGG TGCTTTTTTAAGTAAATCATGGAACTAGTAAATTCTAGAAACTAGAGTTGCCCACTCGTGCAGGAAGATATGAAGCTAGAATGCTAGATTGTGTCGAAAA GCAGTTGCCTTACCTAAATATGGGTCGACTAACTTGTTTTAATCTTCCATAAGTCAATATTCTCTAGTACACTGGCTATGCTTATGGTGGACATGGAATT TACAACTTCCAGGTTGACATGGGTCAGTGATCAGAGATTCAGAGGTGACTTGGTAGTTGGTAGATTTGGTTCTTTAAACAGACAGGTCTCAGCTAGAAAT TGATTGAGGTAATGAGACAAATACTTGCAGGTGTGTGGTTATCAGGCAAGAAAAATGCAATGGATGATTGGGTTGGAGGTGTTCTTCATAGAAGCTTCAT TGAAGCACAGCAGAAATAACCTGAACTAATTTTTTGTGGAACAAGCTCAAGTATGCCTTCGAGCTAGAATTAACATGAAGTAAATTTTTGCTCACTATGT ATTATTGTAGTTACTTGTAAGGCCAATTAAACTTACAAATTTTGTTGTGGTAATCTGTGTTGCAGCCCCTAATATTTATGGTTAAAGGATGTGTAGTTTT CACTACTATACCTACTACCCTATGACATCTCTTCTTTTGTCAGTTGATTATAGAAGTACATTAAAGTTCGTTTGCAAGTTTTGTATCACAACAACGCTAG TTCCACTATTGTACTTTTTTTAAGTTTCTACATTCAAGTATTACAGAAAAATTGCATTCAAGC BLAST |
Tissue | pods |
Gene name | LI_gene_175330; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_278458
Blastp | Protein EARLY FLOWERING 4 from Arabidopsis with 60% of identity |
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Blastx | Protein EARLY FLOWERING 4 from Arabidopsis with 62.75% of identity |
Eggnog | early flowering(ENOG410Y56Z) |
Kegg | Link to kegg annotations (AT2G40080) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460518.1) |
Pfam | Protein of unknown function (DUF1313) (PF07011.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |