| Id Trinity | TRINITY_DN50195_c13_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_278470 |
| Sequence | ATCATGTTGTTTTTTATTCAATAGAGTCGATTTAAATTTATTTCGCTCTTTTTTATAATTGTCGGTGCATGAAATTTCGCAGGTTCTGACCAATAGAAAG TGTTGTTTGTTAATTTTTTATGATACAATGATAATATGTTTTAAATAAAATTATTTTGATAGCAGGAACGAGAAAGTGATGAATAGTTGGGAGTAAATCT AATGTTACTCTGGTGTATGGTTTTAAATTGCAGTCACAATCTCAATTATGATTGTAATTATATGTTCTGTTCAGTGTAGGACATAATTAAAACGTCTAGT GTTTTTTAACTTTCAATCTGTTGGAATCTAGATCACTAACATGGGTCAATGATGTGATTATGTTAATTCTAGGCTGTAGCTTAGAAGTAACACATTTTAT TGCTTGAGTACCTTGTTGTGATTTGTGAGTATAGGCTGCTGCATCATTGCCCGAATGTGGTGAGAAAAAAAACAAGTTTTCCTGCATTTGTGTGAACGAG TGCAGGTAAAGAAGCTATTTCATCAGTCCAAGATATGAATCAAAAAGTGGAATATAAGCACTCTTATATGCAAATCAATCGAAATAAGAGAGACACAATG GTTAGGATGAAAACCAATTTTGTGTGCATACAAGAAACTAAATGGGTTGGTGAAAAGGCAGGAGAATTAGATGCTCAAGGTTTGAAGTTAAGCTAAGACA AGATCGAAAAATGGTGTGGATATAATTGTAGATAAGGAATGAAAGAAGGATGTGATGAATGTAAAAAGAATCAGAGATAAGATAATAACCCTAAACTTTG TAGCAAAAAAAGACACATTTAATGTGATTAGGGCTTATGCAACCCAAGTTAGAGGTCTAGAGGAGCGTCACAAGATAAAATTTTAGGATGATTTGGAAGA TGTAGTCCATGAAATACCTATACGAGAAAATATTTTCACAGGAGGGGATCTCCTTGGATATGTAGGGCGAGATACTAGGGGATATAAAGGTATTCATGAG GGTTATGATACAAGGGAAGCAAATACAAAATGTAAGAGTATTCTAGATTTCTCTTCAGTTTTTTAATTTTACAATAGTCAACATTTATTTGAAGAAACTG GAGGAGCATCTTATCACATATATCAGTGAAGAAGCATGTTCTCAAACTGATTTATTTCTTATAATGAAACTAAATAGAAAGTTTTCCTTAGAGACTCACT CCAAAGCCATACCTGAAGAAAGCATGATGACTCAACAATGAGTTGTGGTTATGAATGTGAGGGTTAAGAGTATAGTGGAGAAAAAGGCCAAGATAGAATC CTAAGAACCAAGTGGTGGATATTGAAGGGTGAGGAATGAAGGAGCTTCCAACAATGCTAACAATATGTGGGATGAGATTGCCAAGGGAATTAAAAAGACA ACAGATGAAACATTAGGTGAGCCTAGAGGCTTTGGACTAAAGAGTAAATATTCATGGTGGTGAGACAAAAGTGTCAAGACAAAGTTCAGGTAAATGGAAT GTTGTATAAAGCATGATCCCTAAAAATACTGAAACTTGGGGAAAATACAAGGTTGCTAAGAAATGCACTAAGAAAGCGGTGAGCAAAGCGAGAGATGAAG TGTTTCCCCTCTCTAGGTACCAAGGGAGGGGAAAGAAGTGTGTATAGGCTTGCAAAAATGGTAGGGAAAGAAAGACAAGAGACTTGAACCAAGTTAAATG CATTAATGATAATATTTTGTCTGCTAATAATTTTAAACAGTGAGGGTATGATTTGAAAATGAAACTAACTTAAGTCATTGGGAAAATTTGGGATTTTCTG TAGTTGATTGGTGCTTATGTATCTTAGAAATGGCCTTTTTATGCAGTTTTAGTTCTACTTGTATATCTGCTGTTATTAATGGAGTATTTCCTTCCTTTGC TTGTAGCTCTTTGTTATGGCAATGTTGCCAGGCAGCAGGAGAGGTCACCATCTGTTATTGTCATAGGTGGTGGCATGGCTGGGACTGCTGCTGCTCGTGC TCTTCAAGATGCTTCATTTCAGGTTGTTCTCTTAGAATCACGGGAAAGACTTGGTGGCCGAATTCACACCGATTACTCATTTGGCTTTCCTGTTGACCTG GGTGCATCATGGTTGCATGGAGTTTGCAAGGAGAATCCACTGGCTCCGTTGATCGGGAAGCTAGGATTACCACTTTATCGTACTAGTGAGGATAACTCTG TCCTCTATGATCACGATTTGGAAAGTTATGCACTCTTCGATATGGATGGGAATCAAGTTCCCCTAGAATTGGTTACAGAAGTTGGTAAACTATTTGAGAG GGTTTTAGAGGAGACAAATAAAATACGACAGGAATTCATTGAAGACATGTCCATACTCCGTGCACTGTCAATTGTTTTTGAAAGAAAGCCAGAATTCAGG TTAGAGGGGCTTGCACACAAGGTGCTTCAGTGGTATTTATGTAGAATGGAAGGTTGGTTTGCTGCAGATTCCGATTCTATATCGCTGAAAAATTGGGATC AGGTAAATTGAATAGGCCAATTTAAAGATGTTTGGGTTATATTATCCATATCTCCCATTTTAAGGTTTTGTCATTGATATTTGACCTACATAACAAACAG TTGTTGGTAACTGGAGAGCTGAAGAATTTTGAACTGCCTTTTTCCCAGTTCAGTTCTTTATCCTTTTCAATCCCCCTTTTCTTTCTATACACATCATTGG AAGTAGATGACTGTGAAGTGGTAAAGTCAGCTTATGACTATAGGGTTTGAGTTTTAATGTTAAATGAAAACGGTATGGGATAAAGGAAATTAGATGTAAA GGATGAAAACATAGATTGAAAATTGGCTTCATTTGGTGACCCTGAGTGCAGTATGTTGTTAGAAGCTTCTTAACTTCTTCATGTATTACATTTTTGTTTT TAAATATTTTTCCTTGTGTAACCTGCCCTTCTCTGTATATTTGCTTATAGGAAGTACTGCTTCCGGGTGGTCATGGTCTTATGGTCCGGGGCTACCTGCC TGTTATACATACCCTAGCTAAGGGCATTGATATTCGCCTGGGACACAGGTAGATACTAGTTTGAAGTTTTGTTTTTGAAGACTATGCTACTTTATGTTGC TTAACTAAATGTACTAGCATTAATAATACCTTATATTTTCAGGGTCACAAAAATAGTTAGGCGATACAATGAAGTGAAGGTGATAACAGAAAATGGGGAA ACATTTGTTGCTGATGCTGCTATTGTTGCTGTCCCGCTTGGGGTGTTGAAAGCAAATATCATAGAATTTGAGCCAAAACTCCCTGACTGGAAGGAAGCTG CCATTACTGATCTTGGAGTTGGGATTGAGAATAAAATAATTTTGCACTTTGAAAATGTATTTTGGCCAAATGTGGAGTTCTTGGGAGTAGTTGCAGAGAC ATCTTATGGATGCAGTTACTTTCTTAATCTCCACAAGGCTACAGGTCACCCTGTCCTTGTTTACATGCCCGCTGGGCAGCTGGCCAAAGACATCGAGAAA ATGTCTGATGAAGCAGCTGCTAACTTTGCTTTTACACAGCTCAAGAAGATCCTTCCAGATGCTTCTTCACCGATTCAGTATCTTGTGTCTCGATGGGGCA CGGATATTAATTCACTAGGTTCGTACAGCTATGATGCAGTTCATAAACCAAATGATCTGTATGAGAGGCTAAGGGTACCAGTAGATAACTTATTCTTTGC AGGGGAAGCAACAAGTATGTTGTATACGGGATCTGTGCATGGTGCCTTCTCTACCGGAATGATGGCGGCCGAAGATTGTAGGATGCGTGTCCTTGAGCGT TACGGAGAGATAGATTTGTTACAGACTGCATTGGGTGAGGAAGCTTCTGCTGTACCACTTCAGATCTCTCGTTTGTAATCTTTCTTGGTGCCATGTTTGT TGTGGACATCCTGTTAGTCATTTTTAATAATTTCATGCAAAACGCACAATGTATAATAAGTAGTGGTGTGGAGATATATGATTGTGGACACACCTAGTTT ATGCTAATAAATATGAGTGTTTCAATTCTGTGGTCTTTTATAAGTCCTATCTGCTAATAGGAATGTTTACTTTTTTAACATTTATTTTTCTTAAATCTAA AACCATAATACCCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175331; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_278470
| Blastp | Polyamine oxidase 3 from Arabidopsis with 75.5% of identity |
|---|---|
| Blastx | Probable polyamine oxidase 2 from Arabidopsis with 82.52% of identity |
| Eggnog | Polyamine oxidase(ENOG410XQHS) |
| Kegg | Link to kegg annotations (AT3G59050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455951.1) |
| Pfam | FAD binding domain (PF00890.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |