Ll_transcript_278472

• Id Trinity: TRINITY_DN50195_c13_g1_i12
• Name Transcript: Ll_transcript_278472
• Sequence: ATCATGTTGTTTTTTATTCAATAGAGTCGATTTAAATTTATTTCGCTCTTTTTTATAATTGTCGGTGCATGAAATTTCGCAGGTTCTGACCAATAGAAAG TGTTGTTTGTTAATTTTTTATGATACAATGATAATATGTTTTAAATAAAATTATTTTGATAGCAGGAACGAGAAAGTGATGAATAGTTGGGAGTAAATCT AATGTTACTCTGGTGTATGGTTTTAAATTGCAGTCACAATCTCAATTATGATTGTAATTATATGTTCTGTTCAGTGTAGGACATAATTAAAACGTCTAGT GTTTTTTAACTTTCAATCTGTTGGAATCTAGATCACTAACATGGGTCAATGATGTGATTATGTTAATTCTAGGCTGTAGCTTAGAAGTAACACATTTTAT TGCTTGAGTACCTTGTTGTGATTTGTGAGTATAGGCTGCTGCATCATTGCCCGAATGTGGTGAGAAAAAAAACAAGTTTTCCTGCATTTGTGTGAACGAG TGCAGGTAAAGAAGCTATTTCATCAGTCCAAGATATGAATCAAAAAGTGGAATATAAGCACTCTTATATGCAAATCAATCGAAATAAGAGAGACACAATG GTTAGGATGAAAACCAATTTTGTGTGCATACAAGAAACTAAATGGGTTGGTGAAAAGGCAGGAGAATTAGATGCTCAAGGTTTGAAGTTAAGCTAAGACA AGATCGAAAAATGGTGTGGATATAATTGTAGATAAGGAATGAAAGAAGGATGTGATGAATGTAAAAAGAATCAGAGATAAGATAATAACCCTAAACTTTG TAGCAAAAAAAGACACATTTAATGTGATTAGGGCTTATGCAACCCAAGTTAGAGGTCTAGAGGAGCGTCACAAGATAAAATTTTAGGATGATTTGGAAGA TGTAGTCCATGAAATACCTATACGAGAAAATATTTTCACAGGAGGGGATCTCCTTGGATATGTAGGGCGAGATACTAGGGGATATAAAGGTATTCATGAG GGTTATGATACAAGGGAAGCAAATACAAAATGTAAGAGTATTCTAGATTTCTCTTCAGTTTTTTAATTTTACAATAGTCAACATTTATTTGAAGAAACTG GAGGAGCATCTTATCACATATATCAGTGAAGAAGCATGTTCTCAAACTGATTTATTTCTTATAATGAAACTAAATAGAAAGTTTTCCTTAGAGACTCACT CCAAAGCCATACCTGAAGAAAGCATGATGACTCAACAATGAGTTGTGGTTATGAATGTGAGGGTTAAGAGTATAGTGGAGAAAAAGGCCAAGATAGAATC CTAAGAACCAAGTGGTGGATATTGAAGGGTGAGGAATGAAGGAGCTTCCAACAATGCTAACAATATGTGGGATGAGATTGCCAAGGGAATTAAAAAGACA ACAGATGAAACATTAGGTGAGCCTAGAGGCTTTGGACTAAAGAGTAAATATTCATGGTGGTGAGACAAAAGTGTCAAGACAAAGTTCAGGTAAATGGAAT GTTGTATAAAGCATGATCCCTAAAAATACTGAAACTTGGGGAAAATACAAGGTTGCTAAGAAATGCACTAAGAAAGCGGTGAGCAAAGCGAGAGATGAAG TGTTTCCCCTCTCTAGGTACCAAGGGAGGGGAAAGAAGTGTGTATAGGCTTGCAAAAATGGTAGGGAAAGAAAGACAAGAGACTTGAACCAAGTTAAATG CATTAATGATAATATTTTGTCTGCTAATAATTTTAAACAGTGAGGGTATGATTTGAAAATGAAACTAACTTAAGTCATTGGGAAAATTTGGGATTTTCTG TAGTTGATTGGTGCTTATGTATCTTAGAAATGGCCTTTTTATGCAGTTTTAGTTCTACTTGTATATCTGCTGTTATTAATGGAGTATTTCCTTCCTTTGC TTGTAGCTCTTTGTTATGGCAATGTTGCCAGGCAGCAGGAGAGGTCACCATCTGTTATTGTCATAGGTGGTGGCATGGCTGGGACTGCTGCTGCTCGTGC TCTTCAAGATGCTTCATTTCAGGTTGTTCTCTTAGAATCACGGGAAAGACTTGGTGGCCGAATTCACACCGATTACTCATTTGGCTTTCCTGTTGACCTG GGTGCATCATGGTTGCATGGAGTTTGCAAGGAGAATCCACTGGCTCCGTTGATCGGGAAGCTAGGATTACCACTTTATCGTACTAGTGAGGATAACTCTG TCCTCTATGATCACGATTTGGAAAGTTATGCACTCTTCGATATGGATGGGAATCAAGTTCCCCTAGAATTGGTTACAGAAGTTGGTAAACTATTTGAGAG GGTTTTAGAGGAGACAAATAAAATACGACAGGAATTCATTGAAGACATGTCCATACTCCGTGCACTGTCAATTGTTTTTGAAAGAAAGCCAGAATTCAGG TTAGAGGGGCTTGCACACAAGGTGCTTCAGTGGTATTTATGTAGAATGGAAGGTTGGTTTGCTGCAGATTCCGATTCTATATCGCTGAAAAATTGGGATC AGGAAGTACTGCTTCCGGGTGGTCATGGTCTTATGGTCCGGGGCTACCTGCCTGTTATACATACCCTAGCTAAGGGCATTGATATTCGCCTGGGACACAG GGTCACAAAAATAGTTAGGCGATACAATGAAGTGAAGGTGATAACAGAAAATGGGGAAACATTTGTTGCTGATGCTGCTATTGTTGCTGTCCCGCTTGGG GTGTTGAAAGCAAATATCATAGAATTTGAGCCAAAACTCCCTGACTGGAAGGAAGCTGCCATTACTGATCTTGGAGTTGGGATTGAGAATAAAATAATTT TGCACTTTGAAAATGTATTTTGGCCAAATGTGGAGTTCTTGGGAGTAGTTGCAGAGACATCTTATGGATGCAGTTACTTTCTTAATCTCCACAAGGCTAC AGGTCACCCTGTCCTTGTTTACATGCCCGCTGGGCAGCTGGCCAAAGACATCGAGAAAATGTCTGATGAAGCAGCTGCTAACTTTGCTTTTACACAGCTC AAGAAGATCCTTCCAGATGCTTCTTCACCGATTCAGTATCTTGTGTCTCGATGGGGCACGGATATTAATTCACTAGGTTCGTACAGCTATGATGCAGTTC ATAAACCAAATGATCTGTATGAGAGGCTAAGGGTACCAGTAGATAACTTATTCTTTGCAGGGGAAGCAACAAGTATGTTGTATACGGGATCTGTGCATGG TGCCTTCTCTACCGGAATGATGGCGGCCGAAGATTGTAGGATGCGTGTCCTTGAGCGTTACGGAGAGATAGATTTGTTACAGACTGCATTGGGTGAGGAA GCTTCTGCTGTACCACTTCAGATCTCTCGTTTGTAATCTTTCTTGGTGCCATGTTTGTTGTGGACATCCTGTTAGTCATTTTTAATAATTTCATGCAAAA CGCACAATGTATAATAAGTAGTGGTGTGGAGATATATGATTGTGGACACACCTAGTTTATGCTAATAAATATGAGTGTTTCAATTCTGTGGTCTTTTATA AGTCCTATCTGCTAATAGGAATGTTTACTTTTTTAACATTTATTTTTCTTAAATCTAAAACCATAATACCCCA
• Tissue: pods
• Gene name: LI_gene_175331;
• Additional information: details;

Expression of Ll_transcript_278472

FPKM

• PAB: 9.5
• PNAB: 7.7
• PS1: 9.5
• PS2: 7.6
• PS3: 13.1
• PW1: 7.8
• PW2: 7.7
• PW3: 8.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_278472

• Blastp: Probable polyamine oxidase 2 from Arabidopsis with 80.08% of identity
• Blastx: Probable polyamine oxidase 2 from Arabidopsis with 80.08% of identity
• Eggnog: Polyamine oxidase(ENOG410XQHS)
• Kegg: Link to kegg annotations (AT2G43020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455951.1)
• Pfam: FAD binding domain (PF00890.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;