| Id Trinity | TRINITY_DN50197_c1_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_279839 |
| Sequence | AGCAAACAAAAATAAAGGAGCCCATAGTTTTGTCCGGGAGGAACATTTTCCACCTATCTTATCTACACAAACGGACACATGTCACCCATGCTCTTTACTA CATGGACAAAACGCCGTCGTTGCGACCGAAATTTTTTCCGTTATTACGATGATATATATTCATTTTTTTTCCTTTACTTTTCTTCTTATCTCTGGGTTCA GTAGAGAGCGAAGTGTAGAGTAGAGACGATAATGGTGGTTCATGGCGGGAAAAAGTTGCACCAAATGGTTGCCGGATTCGGCGGCAATGGCCTCGGCCAG GTCCTAGCCGCCGTCGCCGTATCTTTCCTCGTTCGCTTATTCACAGCTCCCGGCCCCGCTCTGTTGCCGGAGAACGACAATAACGACGACGAGCCAGAGA ACGGTTCTCACGATGGTGAAGCTCCTCACTCCGGAATGGTCACGCCGGTTACAATCCGTTGGAACAACATCAATTGCTCCCTTTCTGACAAATCCTCCAA CGTTGTGAGGTTTTTGCTTAAAAATGTGAGCGGAGAAGCAAAACCTGGAAGATTACTAGCTATAATGGGGCCTTCGGGTTCAGGGAAGACAACATTGCTT AATGTTCTTGCGGGTCAGCTGGCAGCGTCGCAACAGCTGCATTTGTCGGGCCTTCTAGAGTTCAATGGAAAGCCTTCTTCCAAGAACCCTTACAAGTTTG CTTATGTGAGACAAGAGGATCTCTTTTTCTCACAGCTCACAGTACGGGAGACTCTGTCTCTTGCTACGGAACTCCAGCTTCCTAACATATCTTCTGCAGA AGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAACTAGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCGAAAGTTCGTGGAATTAGTGGC GGTGAAAAGAAACGCTTATCAATGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTG AGAAAGTCATGGAAACCCTCCAACAACTGGCACAAGATGGTCACACTGTAATTTGCTCTATTCATCAGCCAAGAGGCTCAGTCTACAGTAAATTCGATGA CATTGTGTTGCTAACACAGGGTTCGCTTGTTTATGCTGGTCCTGCTTCTGATGAACCATTGGCTTACTTCTCAAAATTTGGGTACGACTGCCCAGAACAT GTGAATCCTGCTGAATTTTTAGCTGATCTTATATCCATAGATTACAGCTCTGCAGATAGTGTCTATTCCTCTAAAAAAAGGATTGATGGTCTGGTTGAGT CATTCTCTCAAAGACTATCTACAGTAATATATGCGACTCCAATTATTATAGATGATCTCTCAAAAAGTCGAAAGCAAATCACCAAGAGAACTGTAGCAAA GAAGAAAGGGAGTTGGTGGAAGCAATTTTGGTTGTTGCTTAAGCGAGCATGGATGCAGGCTTCCCGAGATGCTCCAACAAACAAAGTTCGGGCAAGGATG TCAATTGCATCAGCAATTATCTTTGGGTCTGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAA TAAACACAGCTATGGCTGCTCTCACAAAGACAGTAGGTGTGTTTCCAAAGGAACGGGCAATTGTTAATAGAGAACGGGCAAAAGGCTCCTATGCCTTGGG ACCCTATCTGCTTTCAAAATTGTTGGCTGAGGTTCCCATTGGAGCAGCATTTCCGTTGATGTTTGGTGCTGTTTTGTACCCCATGGCACGTCTTCATCCT ACTTTGCTGAGATTTGCTGAATTTTGTGGAATTGTCACTGTGGAATCTTTTGCTGCATCTGCAATGGGTCTCACCGTTGGTGCCATGGTTCCAACCACAG AAGCAGCAATGGCAGTAGGCCCATCTCTTATGACAGTTTTTATTGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGAT TCCTAGCGTGTCTCTGATTAGATGGTAAGCACAATTTTGGATTTTTGAGTAAACAAGTCGATTACTCTATATAGGCTCTTAGCCTCTTAATAGGAAATAG AACTTTATTTTGCTAAACATCCTAGTCGAGGCTCCTGCTCTGGTACTGGTCATTACCTAATGTCATATGCACTTTCAGGGCATTCCAGGGACTTTGCATC AATGAATTTAAAGGTCTTCAATTTGATCATCAGCATTCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGTATTTCATTTGGAGGCAGTAGGATTA GGGATACGGTGGTAGCACAAAATAGAATACTGTTATTTTGGTATTGCACCACCTTCCTTCTCCTTGAGAAAAACAAACCCAAATACCAGCAACTTGAGCC AACCCCTATTGACCACAACGAACCACGTTTAGAACTTGTGGATTTAGACTCCGAACAAGTTGATGAGAGACTTGAATCTCCACCGGCCACGGAAGATGAA TCCAACCAGCCCGTTGAATCACCTGAAGTAGATGATCCAGTTGGCTCTTTTGTCCTAGAAGGTTTGTAATTAGCTGGGCACTAATGCTGTTGTTATCAGA TATTCATATATTTATTGGTTTATATAATACAGGTGCTAAGTAAAGATATCTTTGCAAAGGGTGATCTCCTACAATTACTGAGGTAGGAAGCCGTAGAACA CAGGATCACAATTATGATATGATTATTGGACATCCAAATATCAGCTTATCTTTCATATTTTGTTATTTGTAATAATAACATTGGCAGTGGATAATCTTGG GATGAATCATGTCATGATTATAGCAACTAGTTTTGTTCAATCATCAGTTTAAGTGGAGTTCATTCCCTGAGATGTTTTACCTTGGTTTTGAATAGTGCTA TGACCAATTCATTGTTATTTAAAATTAATATTATTAAATATACTTTAAAATCGAAACCTTATTCCTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175368; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279839
| Blastp | ABC transporter G family member 7 from Arabidopsis with 80.21% of identity |
|---|---|
| Blastx | ABC transporter G family member 7 from Arabidopsis with 80.14% of identity |
| Eggnog | (ABC) transporter(COG1131) |
| Kegg | Link to kegg annotations (AT2G01320) |
| CantataDB | Link to cantataDB annotations (CNT0001119) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428396.1) |
| Pfam | ABC transporter (PF00005.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |