Ll_transcript_279863

• Id Trinity: TRINITY_DN50198_c4_g4_i2
• Name Transcript: Ll_transcript_279863
• Sequence: CTTCTAAGGCATTTGAGTTTTTTTGCCAAATTGAGTTTCTACATGATTAATGAAGTGAACCAGATGAGACCTAGTCTCAGCCTTGGTTTTTAGGAGAATG ATCCAGGTAAATCTTGAGTGATCATCAACAAGAGTTAAGAAATATTTATGGCCATATATAGAACAAGTAGAATAAGGCCCCCATATATCAGCATGCAATA TATCAAAACAGTCAGAGGACACAGAATTGCTATGAGTAAAGGGCAATTTTCTTTGCTTTGCAGTATGGCATACATCACAAGGAGCAATATTATGACTAGT ATGTATAAAAGGGAAATTTTTCTTAAGCTGCATTAAAACAGAGACAGGGGAATGCCCAAGTCTAAGGTGCCACAAGCAATCATTGTTTACAGATTTAGAG GTTGTCTCAGCATTAACATAGTGTCCTACAAAGTGTCTAGAACTGTCTAAGTCTATAAAAAACAAGCCTTGTTGTGGTCTAGCTGAACCAATCATCTTCT TGGTATGGTTCTGCAAAATTAAACACTTATTGTAAGAAAGGATAAAATGGCATTTTAAATCATGCATGAGTTTATTGACTGATAAGAGATTAATATGGAA TTGAGGAACAAAAAGAACATTTGTGAGTACTAAAGAAGGGGTGAGAGTAACTGTACCAGATATTCTTGTGATAACCTTATCACCATTAGGGAGAGTAATG AACATTGGTGCTATAGACTTATAATTTTTAAAATTGTGCACATCATTAGTGATGTGGTCTGTGGCACCAGTGTCCATAATCCAGGGAGATTGCAATTTAC CTGGTGGTGAGGGGCTGCAATTAATCTGCATTGCAGAATTGACAGAATGGTTTTCTGCATTAGCATTATGCATTAGGTCCAGTATGCTTTGAAGTTGCTC ATCAGTGAAGACCTTGCTAGTTCCTGCAGCCTGCTTGGGTGGTTGAGCATCATTGCCTTCATTACTTGAATCCAAAGGGAAACCAACAGTGTGATTGACC ATTCTGTTGGACCTATTATCTTGGAATCCTGGTGGATATCCATGCTTGAGGAAGCAAGTATCAATTGTATGATTAGTTCTTTGACAATGAGTGCAAAATT TGTTTCCTTGGTTTCTATTCCCAAAGTTTTGCCTAGGTCTGTTTCCCTTATAGATGGATCCAGTCCTTCCTCTAGAGTTATATTTTCCTGAGTTGCCTTC AGCATTTGTAGAGTTCTTGTATGAGTCTTGCTTAGTGCTAAGAGATAGAGCCTTATTTGTTGATTCAGGGTCAGTGAGTATAGGAGCATCAAATTGTCCT TCCTGTTGGCTCAATAGAGAAAAGGCCTTGCTTATGCTTGGTAAAGGGTCATAGAGCATAATTTGGGATCTCACATGTGCATACTGATCATTCAAACCAG TAAGAAACCTCATCACATAGCATTGCTCTCTATAGTTCCTAACCACAGAAATCACACCACATGAGCATGGATTCTGACATCTGCAGCTAGGAATTGGCAT GAAGTTTTCTATTTCTTCCCAAAGACTCTTGAGCTCACCAAAATATTCAGAGATGGTGAGATTTCCTTGGTTCAGGTAGTAAAATTCATGCAGAAGCTTT GAGATCCTGAACATGTCCCCTCTTGAAAATCTTTCTTGAAGATCTTTCCAAACTTCAGCAGCAGAATCAATCCACAGTATTGACTTAACAATAGAATCTT CTACAGATCTTTGTAACCATGCCAAGACCATATTGTTGCATCTTTTCCATAGATCATGCATAGGGTCATCTGGTGCTGGTTTCTTGAGTGTTCCAGTAAT GAACATCAACTTGTTCTTGGAGTCTAAGGCAATGTTCATGGCTCTAGCCCAAGAGTGGTAATTGGAACTGCTCAACCGAGGTGTCACAAGAACTTGTGCA GGACTTTCAGTGGGATGAAGGTAGTATGGGTTGTTGCTTTGGTCCATAGGATAACTTGAGAGTGCCATTTTTGAGAGAGACCGAATAGAGGAGGGAGAGG AGAAAAGGTGAGAAAGAGGGTAATGCTTTGGGAAGATGAATCAGAGCATATGTTGCTCTGATACCATCTTAGAGAAGTGGCAGCGGAAGAAGAAAAGAAG AAAAGAAGAAAATGGCAAGATAATGAACCTTTAGCAAGGAGAAAAAATAAACCAGGGAGTAATAGAGAAGAAGAAGAAAGTTTAACCAAAATAGAAACTT TATTAACCAATAAAACTAATTGACCTTCTATATAAGGAAGGAAAAATAACAGACTAACTAAAACAGAAAGGAATGGGCCAGGGCCCAGAAACTATCTAGA AACAAAAGAAAATAAGGCCAGAAGCCTTAGCAGCCCAGAAGCAAAATAAAAGATAGAAAACAGAAGAAAAGGAAGAGCAATAGGAAGCCATGGAAATCCA TGGAAGCTTAGAGCACAAGAAACAATTTAACAGTTACCTCCGACACTCTCATTTTCTGAAACATCAGGAATTATATTAGCTAATGATATGATTGCCCAAG ACCAGAATAACAAGAACAATAGCTCTCAAGATAGTATTCCTACAGGTGATGAACAAAAAGGTATTATTCATTGTTATTTTTTTTCTTCTTTTTCCTTTAC CTTAAAGAAACTTCTTGTCATATAAGTCAAATCTCTCAATTTGTTGTTCGCAATTTTCATTAGCCAAAACCAAATCATATGGCGCTTTATACGCTTCTTT GTTTTACCTGTCACCTTTTCTTGGGTTCAAGCACAAACATTCTTTTCTTTGACTGATGTAGACCAAACTTTTAATATCTTAAGTCATACCAACCTATTAA ATGGCAAAAAAAAATTATTAGAGTCTCACATAAGTTTAAGTAAGGGAAAAATGTAAGATTGATAATAAATAAACACAAAAAAGAGAAATTATGACAATGG TTTTTGTAAACTTTTCTATTTGATTGATTCAATTGAGAAAGAAAATCTTATCACAAGTAAGACCTCTAACCTTGCTATTAATTATTTAGTTAATGCCAAG GAACTATGCCCACCTAAAAGTTTAAACTCAGAATTTCACGTGAGTTGCTTTCTATTTGTTTGTACTACTACTAAGTCATATTAGAAAGTGTATAGATATC AAATTTTGTTTACAGAAGCCATACATCAGTTATTTGATCTAATGGAATGTCATGTGCAGATTCGAACCTCCCTAAGTCAAATCTGATGCCATCACATTCA GCACATGTTCATATGCCAATGCCATGGCCTTACAATGTTCCTCCATATATGTATAATCTTCAGAATCCTATTCAGCAAATGCCTTCATACCAAGGATATC CTATGGCTAATATGCCGTCTGTTCATCCTTACCTTCCAAGAAATATGAAATGGCCTTCTAACCAGGGAGAGAATCAGAAATCATCAAAGAAAAAGGAGAA ATCTCGGTATAAGAAAGGACCAGAAGAATATGATGACCAGCAGACAGAGTCCAGCGATCCTGACTCCGAGAGTGAATCTAATTCAGATGAACTACGGGAC TCAAACAATTCATTGAAGGATGATTCGAAGAGGAAAAATCACAGAAGAAAGTCCTCTGGAACAGTTGTGATTCGTAATATCAACTCACTCCGAAAAGGAG AAATGGAAATGATGATGGACTCTCTGATGAATCTTCTGTAGATGATGATGTCATGAATGAAGTAACCATCAAACACAAGGTTGGTGCTGCACTTGAGTCA TTGCAAAAGGTCCATAAAGTTGAAAAACATGCTAATGGAAAAAAATCGAAGGCCCGACGCAATGGAACTAAGTCAAGTCATGCTGCTGAGCATGACCTCA CTGAAAAGTCGAGTGATGCATCTGAGGGAGGGAACAAAAATGAGAATTGGGATGCATTCCAGAACCTTTTGAAAATAGATGAGGACACTGGAATTGATGG ATCAGAAAGGGTGAACAAAATTGATGTCCAGGATGAACATTTTGTGGTGAGAAACTTTGAGGAGGAAAGAATGCCATATGAAGCTGTTAGTTCATTTCCT AGCTTGGATTTCAAAGAAGTTCGGAAGAATCCTAAAGTCTCGAATGAATCCTTTGTTGTGACTCATAGAGATGGAGGAAATGAAGGTGAATCCAAGTTGG ATGGTTATGTAGACAGCAATAGTGTAGTTGCAAAGAGTAGGAATTTTATGAGTGAAGAAGTACTGCTATCACATAGATCAAAAGAACCGGGAAATGAACT TGGTGATCCATTATCTACTTTCATTGCTGATTCATCAGTAACAAAGGGGAAAACAGCAGAAGATTGGTTTATTGTTGATAATTTGGATAAGATGAGGAGC CCTGATCTCTCAGTTATGCCTGCAATGTTTGATGGTGATTATACCTTGTCATCGGTTAATGATAAATCTCCATCTGATAAAAGAAGTGAAAGAACTTTCA CTGATGATTCCTTCATGATACAAGGCCAATTGGTAGATAATAGTATTTCTGACTCACAATGGAAGACAGATATAAGTATGGCTGCAGATCTAACTCCTTC CAGCAAACTGGAAAGCTCGAATGAGAAGCATGCATTATCATATAACCAGGAGCCGAATGACCTCTGTGTAGTTCTACAACGGGACTCGGGAACAGATTCT GTTGCAGCCTCGTGGTCCATGGACTACGAAATCGACTTCTCTTACTCAGAAGTTGATAAAAGATCATCCATTGATGATTCACAAGATAATGCAAATAAGG TTCCTGTTATTCCTGAAGAAACCAACATGAATAAAAGCAAAGTTTCAGGAACAAGAAACTCTGAAAAAGAATTGAAGTCAAAGACTTTGCGCGGATCCTA TGGAAGAGGCAAGCCTGAAATCATCCCCAGGAACAAAAGGTCACCTCTGACAAGCAAGCCAATAGTTCAGAAGAGCAAGCGCGAACAGGAAGATGAAATT AGGAAGAAGATGGAAGAAATCGCGACTGAACGCCAGAGGAGAATTGCCGAAAGAACTGCATCCTCTGGTCTTGCTCCAGCAGCAAAGGTTTCTCCTAAAA GTGACAAGAATAAGGTTCAATCCATGAAAGATACAAACAGAAACAGTTCTGTCAAGGTCAAGGGAATTTAGCAAAACTGTTATTACTTATCAGCACTGGG TTCATTCAATTCAATGTCAATGCAGTCTTATAAGGTACAGGGTCATTCTAAAGTCTACATGGTAAAGTAAATTGAAGTAATGGTTGATTGAAATGAGTAG TTTTTCCCCTATGAACTATGAGTCATTGGATGATATTCAGACTTGTACTCACTCAATATATTTATTTGTTGTATTTTGATTGATGGCTGTATGTTAATAT TTATTTATTTCGTATGCCGATTCATGGTTGTACGTTGAAGCTCGATGTAATGATGCGATCTTTGTGATTAAGAGTTCAAATCTTCCTAATAGTTCCA
• Tissue: pods
• Gene name: LI_gene_175383;
• Additional information: details;

Expression of Ll_transcript_279863

FPKM

• PAB: 1.2
• PNAB: 5.8
• PS1: 3.1
• PS2: 4.5
• PS3: 2.7
• PW1: 3.9
• PW2: 6.7
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279863

• Blastp: COP1-interacting protein 7 from Arabidopsis with 28.31% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 29.1% of identity
• Eggnog: NA(ENOG4111427)
• Kegg: Link to kegg annotations (AT4G27430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425636.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;