Ll_transcript_279865

Id TrinityTRINITY_DN50198_c4_g4_i4
Name TranscriptLl_transcript_279865
SequenceCTTCTAAGGCATTTGAGTTTTTTTGCCAAATTGAGTTTCTACATGATTAATGAAGTGAACCAGATGAGACCTAGTCTCAGCCTTGGTTTTTAGGAGAATG ATCCAGGTAAATCTTGAGTGATCATCAACAAGAGTTAAGAAATATTTATGGCCATATATAGAACAAGTAGAATAAGGCCCCCATATATCAGCATGCAATA TATCAAAACAGTCAGAGGACACAGAATTGCTATGAGTAAAGGGCAATTTTCTTTGCTTTGCAGTATGGCATACATCACAAGGAGCAATATTATGACTAGT ATGTATAAAAGGGAAATTTTTCTTAAGCTGCATTAAAACAGAGACAGGGGAATGCCCAAGTCTAAGGTGCCACAAGCAATCATTGTTTACAGATTTAGAG GTTGTCTCAGCATTAACATAGTGTCCTACAAAGTGTCTAGAACTGTCTAAGTCTATAAAAAACAAGCCTTGTTGTGGTCTAGCTGAACCAATCATCTTCT TGGTATGGTTCTGCAAAATTAAACACTTATTGTAAGAAAGGATAAAATGGCATTTTAAATCATGCATGAGTTTATTGACTGATAAGAGATTAATATGGAA TTGAGGAACAAAAAGAACATTTGTGAGTACTAAAGAAGGGGTGAGAGTAACTGTACCAGATATTCTTGTGATAACCTTATCACCATTAGGGAGAGTAATG AACATTGGTGCTATAGACTTATAATTTTTAAAATTGTGCACATCATTAGTGATGTGGTCTGTGGCACCAGTGTCCATAATCCAGGGAGATTGCAATTTAC CTGGTGGTGAGGGGCTGCAATTAATCTGCATTGCAGAATTGACAGAATGGTTTTCTGCATTAGCATTATGCATTAGGTCCAGTATGCTTTGAAGTTGCTC ATCAGTGAAGACCTTGCTAGTTCCTGCAGCCTGCTTGGGTGGTTGAGCATCATTGCCTTCATTACTTGAATCCAAAGGGAAACCAACAGTGTGATTGACC ATTCTGTTGGACCTATTATCTTGGAATCCTGGTGGATATCCATGCTTGAGGAAGCAAGTATCAATTGTATGATTAGTTCTTTGACAATGAGTGCAAAATT TGTTTCCTTGGTTTCTATTCCCAAAGTTTTGCCTAGGTCTGTTTCCCTTATAGATGGATCCAGTCCTTCCTCTAGAGTTATATTTTCCTGAGTTGCCTTC AGCATTTGTAGAGTTCTTGTATGAGTCTTGCTTAGTGCTAAGAGATAGAGCCTTATTTGTTGATTCAGGGTCAGTGAGTATAGGAGCATCAAATTGTCCT TCCTGTTGGCTCAATAGAGAAAAGGCCTTGCTTATGCTTGGTAAAGGGTCATAGAGCATAATTTGGGATCTCACATGTGCATACTGATCATTCAAACCAG TAAGAAACCTCATCACATAGCATTGCTCTCTATAGTTCCTAACCACAGAAATCACACCACATGAGCATGGATTCTGACATCTGCAGCTAGGAATTGGCAT GAAGTTTTCTATTTCTTCCCAAAGACTCTTGAGCTCACCAAAATATTCAGAGATGGTGAGATTTCCTTGGTTCAGGTAGTAAAATTCATGCAGAAGCTTT GAGATCCTGAACATGTCCCCTCTTGAAAATCTTTCTTGAAGATCTTTCCAAACTTCAGCAGCAGAATCAATCCACAGTATTGACTTAACAATAGAATCTT CTACAGATCTTTGTAACCATGCCAAGACCATATTGTTGCATCTTTTCCATAGATCATGCATAGGGTCATCTGGTGCTGGTTTCTTGAGTGTTCCAGTAAT GAACATCAACTTGTTCTTGGAGTCTAAGGCAATGTTCATGGCTCTAGCCCAAGAGTGGTAATTGGAACTGCTCAACCGAGGTGTCACAAGAACTTGTGCA GGACTTTCAGTGGGATGAAGGTAGTATGGGTTGTTGCTTTGGTCCATAGGATAACTTGAGAGTGCCATTTTTGAGAGAGACCGAATAGAGGAGGGAGAGG AGAAAAGGTGAGAAAGAGGGTAATGCTTTGGGAAGATGAATCAGAGCATATGTTGCTCTGATACCATCTTAGAGAAGTGGCAGCGGAAGAAGAAAAGAAG AAAAGAAGAAAATGGCAAGATAATGAACCTTTAGCAAGGAGAAAAAATAAACCAGGGAGTAATAGAGAAGAAGAAGAAAGTTTAACCAAAATAGAAACTT TATTAACCAATAAAACTAATTGACCTTCTATATAAGGAAGGAAAAATAACAGACTAACTAAAACAGAAAGGAATGGGCCAGGGCCCAGAAACTATCTAGA AACAAAAGAAAATAAGGCCAGAAGCCTTAGCAGCCCAGAAGCAAAATAAAAGATAGAAAACAGAAGAAAAGGAAGAGCAATAGGAAGCCATGGAAATCCA TGGAAGCTTAGAGCACAAGAAACAATTTAACAGTTACCTCCGACACTCTCATTTTCTGAAACATCAGGAATTATATTAGCTAATGATATGATTGCCCAAG ACCAGAATAACAAGAACAATAGCTCTCAAGATAGTATTCCTACAGGTGATGAACAAAAAGGTATTATTCATTGTTATTTTTTTTCTTCTTTTTCCTTTAC CTTAAAGAAACTTCTTGTCATATAAGTCAAATCTCTCAATTTGTTGTTCGCAATTTTCATTAGCCAAAACCAAATCATATGGCGCTTTATACGCTTCTTT GTTTTACCTGTCACCTTTTCTTGGGTTCAAGCACAAACATTCTTTTCTTTGACTGATGTAGACCAAACTTTTAATATCTTAAGTCATACCAACCTATTAA ATGGCAAAAAAAAATTATTAGAGTCTCACATAAGTTTAAGTAAGGGAAAAATGTAAGATTGATAATAAATAAACACAAAAAAGAGAAATTATGACAATGG TTTTTGTAAACTTTTCTATTTGATTGATTCAATTGAGAAAGAAAATCTTATCACAAGTAAGACCTCTAACCTTGCTATTAATTATTTAGTTAATGCCAAG GAACTATGCCCACCTAAAAGTTTAAACTCAGAATTTCACGTGAGTTGCTTTCTATTTGTTTGTACTACTACTAAGTCATATTAGAAAGTGTATAGATATC AAATTTTGTTTACAGAAGCCATACATCAGTTATTTGATCTAATGGAATGTCATGTGCAGATTCGAACCTCCCTAAGTCAAATCTGATGCCATCACATTCA GCACATGTTCATATGCCAATGCCATGGCCTTACAATGTTCCTCCATATATGTATAATCTTCAGAATCCTATTCAGCAAATGCCTTCATACCAAGGATATC CTATGGCTAATATGCCGTCTGTTCATCCTTACCTTCCAAGAAATATGAAATGGCCTTCTAACCAGGGAGAGAATCAGAAATCATCAAAGAAAAAGGAGAA ATCTCGGTATAAGAAAGGACCAGAAGAATATGATGACCAGCAGACAGAGTCCAGCGATCCTGACTCCGAGAGTGAATCTAATTCAGATGAACTACGGGAC TCAAACAATTCATTGAAGGATGATTCGAAGAGGAAAAATCACAGAAGAAAGTCCTCTGGAACAGTTGTGATTCGTAATATCAACTCACTCCGAAAAGGAG AAATGGAAATGATGATGGACTCTCTGATGAATCTTCTGTAGATGATGATGTCATGAATGAAGTAACCATCAAACACAAGGTTGGTGCTGCACTTGAGTCA TTGCAAAAGGTCCATAAAGTTGAAAAACATGCTAATGGAAAAAAATGAAGGTCGGACGCAATGGAACTAAGTCAAGTCATGCTGCTGAGCATGACCTCAC TGAAAAGTCTAGTGATGCATCTAAGGGAGGGAACAAAAATGAGAACTGGGATGCATTCCAGAACTTTTTGAAAATAGATGAGGACACTGGAATTGATGGA TCAGAAAGGGTGAAGAAAATTGATGTCCAAGATGAACATTTTGTGGTGAGAAACTTTGAGGAGGAAAGAATGCCATATGAAGCTGTTAGTTCATTTCCTA GCTTGGATATCAAATTCCTCCTCCTTCCTAACTCTTTGGTTTCTTTCCTTCTCTTCCCCTTGTGACTCCCAAAGAGACCCTAATAGAAGCAAAAGACAAT ATAAGGAATTTGTCAACCAGTCATCATAGATCATGTCTGGTTTTTGTAGAGTCAACAATATCTATGATAGAAATATGCTTGAAGTTGAAGATGATGTTAT TTCTAACTATCCAAACGAACCAAACACTTGTCAGCCAAATAGTGCTCCGATACTTCCTAGGTTGAATGGTAAGCCTAGTGGATGAAGAAGTGGTTGGTCA ACTTTTGAGGATGATAAAATTGAACTAGTTGTAGATCGAATGACACACTGAATAAGTACACATGTAAAAATAAAACAAATGTTGTGAGGATTTGTATTGT TCATCATAAAGTTTGCATAACTACCATATTAAAAATCGACCCCTCTCCTAAGAAGAGCATCCATTGTTGACACTCTATCTTGGAATAGACACTAAGCAAA TGTGATAACCTTCAAAGGAGATTTGAAATTCCATACGGTATGAAAGAGATGCGAGTCCTCATCCCACAGTGAGGTCTGCCTATTGAGAAGCGAATAAGTA GGCTTAACATACTAATATTTAGATTTAGCGTGAGACCACTCCCAAGAATCCTTAATGTTACTCTCGATGACACACTTCCCAATAATGTTGAGGAGCTTGT TGATGTGATCTTGTTCCTAAGAAAAAGGGGAACTACACCAAGATAAGTTCTACACTCAATTCCCATCATCCCAATGGCCAAAATTGCCAATACATGCATC TTTATTAATATTGAGGTTGTAAAGTGGATGGAACTGATCCATGAGATTTCTAGGATCCACCCATTTATCATACTAAGCCATCCTAAGAACCAATTCATAG TCATAGCATCTAGTTGATAACTTATCAAGATTACGAAACCAAAGAGAACACTTGCTCTTGAATTAATTTTATGATTGGTCTTAGATCCACACCAACGAAA GTCTCTTTGAATTTTTTAGATTGGGTAACACAAGGGGTTTTATAAAAAGATAGAAGAGACAACACTTGTTGTATATTAAAGTCGGAC BLAST
Tissuepods
Gene nameLI_gene_175383; 
Additional informationdetails; 

Expression of Ll_transcript_279865

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_279865
BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 28.73% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 29.1% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019430200.1)
Pfamgag-polypeptide of LTR copia-type (PF14244.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;