Ll_transcript_279140

• Id Trinity: TRINITY_DN50199_c0_g2_i3
• Name Transcript: Ll_transcript_279140
• Sequence: CACAGGTCTGTGAATCTTCTCAAGGAGAATGAAGACATTTTATTTTCTCGTGTCTACTATAACCATTGTGCTGTCTATCCTACAGGCAGCTTCAGGTTCA CCCAACGAAAATTTTCTCAAATGTCTTTCTCACCATTCAAAAACTCCAAACCCTATTTCAGATGTTGTTTACACCCAAAGCAACAATTCATTCTCAGTCA TCTTGAATATGCATATACAAAACAAAAGATTCAAAGCAGCAACAACAGCAAAGCCTCTAGCTATTATAACTGCTCAACGTGAATCTCATGTCCAAACCAC TATTTTATGTGCCAAGACTCATGGCATTCAGATTAGAATCAGAAGTGGTGGCCATGACACTGAAGGCCTTTCATATGTATCTGATGTTCCATATGTTGTA CTTGACTTGTTCCCCCTCCATTCTGTTGATGTGGATATATCATCTGCAACAGCATGGGTTGAGGCTGGTGCAACACTTGGCCAACTTTACTATCACATTT ATGAGAAAAGCAAAGTTCATGCATTCCCAGCAGGTGTGTGCACTACTTTAGGGACTGGTGGCCATTTCTCTGGTGGTGGCTATGGGAATCTGATGAGAAA ATATGGTCTTTCAGTGGATAATATCATTGATGCAAAAATTGTTGATGCTAATGGTAATATCCTTGATAGAAAATCAATGGGAGAGGATTTATTTTGGGCC ATAAGAGGAGGTGGTGGAGCCAGTTTTGGTGTCATTCTTTCTTGGAAAATCAATTTGGTGCCTGTACCTGCTACAATAACAGTATTCACTGTGAATAAAA TTGTGGAAGATGGGGCAGCTGATGTTCTTTACAAATGGCAAGAAGTTGCACCAAACCTAGATCAAGATCTTTTCATAAGAGCACAACATTCAGTGGTGGA TGGAACTAAAGGGGGTAAGAAGACAGTGCGAGTTGCTTTTGTTGGTGAATTCTTGGGAACAATTGATAGGCTTCTACCTTTGATTAGTAAGAGTTTCCCT GAACTTGGTTTGAAAAAAAGTGACTGCATTGAAATGCCTTGGATTAATAGCACTCTTTACTGGAACGGCAATCCAGTGGGTACTCCACTAGAAACTTTAC TTACTGTTCCCAAGGAGCCTATGCCAATCTACTTTAAAATCAAGTCAGATTATATAAAGAAACCTATTCCAAAGAAAGCTCTTTATGCCATATGGGATAA GTTTATTGAAAGTAAAAGTATGGTTATGCAATGGAATCCTTATGGGGGAAAGATGGCACAAATTCCATCTTCAGCTACCCCATTTCCTCATAGGGCAGGG AATTTGTTCAAGATTCAGTATTTTTTATTTTGGACTGAAGATGGAGATGAGGCTAATAATCGTTATCTCAACATTTCAAGATCATTTTATGATTTGATGG CTCCTTATGCCTCAAAGTCACCAAGGGAGACATTTCACAACTATAGGGATATTGATATTGGTGCTAACCATCCAAGTAATAGAACAAGCGAGAACATAGC TAGAACTTATGGGAGCAAATATTTCAAAGAGAACTTTGATAGATTAGTGCAAATCAAAACTAAGGTTGATCCTCTTAATTTCTTCAGATACGAACAAAGT ATTCCAACTAAGTCTGGCTATTAGTGAGACAATCAATAATGTCTGTGGAGAAAAGTTAAGTGATGTAAAAGTTTGATACTTCTGCTTAGTCATAATTGTC GGCGATTAACATAATCCTGAAATAAACATAAAAAACAAAAGATATATTTTGTTCATGATATTGAAAACTAAATATTTAAATATTACATATGCTAC
• Tissue: pods
• Gene name: LI_gene_175388;
• Additional information: details;

Expression of Ll_transcript_279140

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 8.5
• PS2: 8
• PS3: 50.2
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279140

• Blastp: Berberine bridge enzyme-like 17 from Arabidopsis with 55.25% of identity
• Blastx: Berberine bridge enzyme-like 17 from Arabidopsis with 55.25% of identity
• Eggnog: FAD linked oxidase domain protein(COG0277)
• Kegg: Link to kegg annotations (AT4G20800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445618.1)
• Pfam: FAD binding domain (PF01565.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;