Id Trinity | TRINITY_DN50199_c0_g2_i7 |
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Name Transcript | Ll_transcript_279157 |
Sequence | CACAGGTCTGTGAATCTTCTCAAGGAGAATGAAGACATTTTATTTTCTCGTGTCTACTATAACCATTGTGCTGTCTATCCTACAGGCAGCTTCAGGTTCA CCCAACGAAAATTTTCTCAAATGTCTTTCTCACCATTCAAAAACTCCAAACCCTATTTCAGATGTTGTTTACACCCAAAGCAACAATTCATTCTCAGTCA TCTTGAATATGCATATACAAAACAAAAGATTCAAAGCAGCAACAACAGCAAAGCCTCTAGCTATTATAACTGCTCAACGTGAATCTCATGTCCAAACCAC TATTTTATGTGCCAAGACTCATGGCATTCAGATTAGAATCAGAAGTGGTGGCCATGACACTGAAGGCCTTTCATATGTATCTGATGTTCCATATGTTGTA CTTGACTTGTTCCCCCTCCATTCTGTTGATGTGGATATATCATCTGCAACAGCATGGGTTGAGGCTGGTGCAACACTTGGCCAACTTTACTATCACATTT ATGAGAAAAGCAAAGTTCATGCATTCCCAGCAGGTGTGTGCACTACTTTAGGGACTGGTGGCCATTTCTCTGGTGGTGGCTATGGGAATCTGATGAGAAA ATATGGTCTTTCAGTGGATAATATCATTGATGCAAAAATTGTTGATGCTAATGGTAATATCCTTGATAGAAAATCAATGGGAGAGGATTTATTTTGGGCC ATAAGAGGAGGTGGTGGAGCCAGTTTTGGTGTCATTCTTTCTTGGAAAATCAAATTGGTTCCTGTACCTGCTAAAGTAACAGTATTCACTGTGAATAAAA TTATGGAAGATGGTGCAGCTGATGTTCTTTACAAATGGCAAGAAGTTGCACCAAACCTAGATCAAAATCTTTTCATAAGAGTAGCACATTCATTGGTGGA TGGAACTAAAGGGGGTAAGAAGACAGTGCAAGTTGCTTTTATTGGTGAATTCTTGGGAACAATTGATAGGCTTCTACCTTTGGTTAGTAAGAGTTTCCCT GAACTTGGTTTGAAAAAAAGTGACTGCATTGAAATGCCTTGGATTAATAGCACTCTTTACTGGGATCGCATTCCAACGGGTACTCCACTAGAAACTTTAC TTACTATTCCCAAGGAGCCTATGACAATCTATTTTAAAAGCAAGTCAGATTATATAAAGACGCCTATTCCAAAGAAAGCTCTTTATGCTATCTGGGATAA GTTTATTGAAAGTAGAAGTATGATTATGCAATGGAATCCTTATGGGGGAAAGATGGCACAGATTCCATCATTAGCTACCCCATTTCCTCACAGGGCAGGG AATTTGTTCAAGATTCATTATTTATCACTTTGGACTGAAGATGGAGATGAGGCTAATAATCGTTATCTAAACATTTCAAGGTCATTTTATGATTTGATGG CCGCTTATGTGTCAAAGTCACCAAGGGAGACATTTCATAACTATAAGGATGTTGATATTGGTGCCAACCATCCAAGTAATACAACAAGCTTGGACATAGC TAGAACTTATGGAAGCAAATATTTCAAAAACAACTTTGATAGATTAGTGCAAGTTAAAACTAGGGTTGATCCTCTTAATTTCTTCAGATATGAACAAAGT ATTCCTCCTAAGTCTAGTAATTAGTGGGAGATAATTTTCTAGGGAGAAAAGGTAAGTGATGTAGAAACTGAAGGCTTCTGCTTAGTTACAATTATGGTGA TTAACCTAATCCTAAAGTAAAATTGAATAAAAAACAAGACATATCGACATATCTTATTTATGGTGTCGAATACCAAATATTTAAATCTTCAAATGCTACT CGTGAAATAAATAAAAAATATTG BLAST |
Tissue | pods |
Gene name | LI_gene_175388; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279157
Blastp | Berberine bridge enzyme-like 17 from Arabidopsis with 54.28% of identity |
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Blastx | Berberine bridge enzyme-like 17 from Arabidopsis with 54.28% of identity |
Eggnog | FAD linked oxidase domain protein(COG0277) |
Kegg | Link to kegg annotations (AT4G20800) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445618.1) |
Pfam | FAD binding domain (PF01565.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |