Ll_transcript_499295

• Id Trinity: TRINITY_DN50202_c0_g1_i23
• Name Transcript: Ll_transcript_499295
• Sequence: CAGATACCTACGACACATTCGATCCTTCACTCTCTTGCGTTTCGATTCTTCATTTTCATCAAACACTCTTTCTCTCTCTAAGCCCAGATTCAACATAATC TGCAAAATTAACCTAATTTCGTCACATGGCGTGGATTCGTTTGATAACTCAGGTAGCAAGGAATCAATCAGCATCTGTACAGGTCAAAGATTTGCTTCTT AGAAGCTATTTATCGGCTAATAAATTTAAAGGCTCTGCAGGAAATAGGCTCTTGTGTGCACAGAAGAAATTCCAATCCAGCTATGTTGGCAATCTGGCCC GTCGAGTACGTGATGCAGATGAAGCCAGTGAAGTTGCTCATCTTAAAGAACTTTACCGTCGAAATGATCCCGAAGCTGTAATTAGAGCTTTTGAAAGTCA GCCATCTCTGCATTCTAATCATTCCGCACTTTCTGAATATGTTAAAGCATTAGTGAAAGTTGATAGGCTGGATGAAAGTCAACTACTGAAGACTTTACGG AAAGGTGTTTCTAATTCAGTGAGGGAGGAAGAGAGTATAGGTGGCTTTTCTGCTCTTCGAAATGCGGGAAAACCTGCAAAAGATGCAGTGCTTGGAACTG CAAGTTTTCCAATTCATATGGTGGCTGCAGAAGGTGGAAATTTTAAAGATCAGCTATGGCGTACAATTAGGTCTGTTGTAGTGGTCTTTCTCTTAATTTC TGGTGTAGGAGCACTCATTGAGGATAAAGGAATTAGTAAAGGACTTGGTATGAGCGAAGAAGTGCAACCCAGTGTGGAGTCCAATACTAAATTTAGTGAT GTAAAAGGTGTTGATGAAGCTAAGGCAGAGCTGGAAGAAATTGTTCACTACCTACGAGATCCTAAGGTAGGCATCTTTAGCACAGATATATGCTATCTCT TGCATAGATTTATTCCTCTAATGCTTGAGTGTTTAAACTTGTATGTCTAGAGAACAATGTGACCTTTCTATATCATATTTTTGGTAGTTATAATCTATAT TCTTCTTTACGGAGTGTACAAGGCGCCCTTTCTCTATACTATCTTGGATGACTTGTTTCCTTTGTGATAGCGCTTTACTCGTCTTGGTGGAAAGCTCCCG AAAGGTGTTTTGCTTGTTGGCCCACCTGGCACCGGTAAAACAATGTTGGCAAGAGCTATTGCTGGAGAGGCAGGAGTTCCTTTCTTCTCATGCAGTGGAA GTGAATTTGAAGAGATGTTTGTTGGTGTTGGTGCACGAAGGGTGAGGGATCTTTTTTCTGCTGCAAAGAAGCGATCACCTTGTATAATCTTCATCGATGA GATTGATGCTATTGGAGGAAGCCGAAATCCGAAGGACCAAATGTATATGAAGATGACTCTAAATCAGTTGCTTGTTGAGCTAGATGGATTCAAGCAGAAT GAAGGTGTAATAGTAATTGCAGCTACGAACTTTCCGGAGTCACTAGATAAGGCTTTGGTAAGACCTGGGCGGTTTGATCGCCATGTTGTTGTACCCAATC CAGATGTAGAAGGAAGGAGACAGATTTTGGAGTCCCACATGTCAAAGATTCTGAAGGCTGATGATGTTGATCTAATGATAATTGCTCGAGGAACACCTGG GTTCTCTGGTGCCGAGCTTGCAAACTTGGTTAATGTTGCTGCCCTCAAGGCTGCAATGGATGGTGCTAAAGCTGTGAACATGAATGATTTAGAGTTTGCG AAGGACAAGATTATCATGGGAACTGAACGCAAGTCGGCCGTCATATCTGAGGAGTCAAGAAAAACTACTGCTTTCCATGAGGGTGGCCATGCCCTAGTGG CAATTTATACTGATGGAGCACTTCCTGTTCACAAGGCTACTATAGTTCCACGTGGGATGGCTCTTGGCATGGTTTCTCAATTGCCTGATAAGGATGAGAC CAGTTTCTCCCGTAAACAAATGCTTGCTCGGCTTGATGTTTGCATGGGAGGTCGAGTTGCTGAAGAGATAATTTTTGGAGAAAGTGAAGTTACCTCAGGC GCATCCTCAGATCTTTCACAGGCAACTAATCTGGCTAGGGCAATGGTTACTAAATATGGTCTGAGCAATGAAGTTGGACTTGTCACTCATGAATACCATG ATGATGGGAGAAGCATGAGCTCAGAAACTAGGCTGCTTATCGAGAAAGAGGTGAAGAACTTGCTTGAAAGAGCTTACAACAATGCAAAAGCTATTTTAAC CACCCACGATAAGGAGCTTCATGCGCTCGCAAATGCTCTTTTGGAAAAGGAGACACTTACCGGAAGTCAGATAAAGGCTTTGCTTGCAAAAGTTAACTCC CAGCAGCAGCAGAAGAGACATGCAGTCGAAGCTCAGGGCGGCAATTCACGGTCCAATGCAGCAGCGGCTGCGGCTGCAGCAGCTTCTGCTGTGACCAAGG GTCAGGGTATTGCCCCAGTAGGATCTTAGCAGGAAAAGGCAGCAGTGACACATGCTACAAAACAACTATTACCGGATTGAAATGTGCAGATAGATTTGAT GTTTTTGGGGTTCATGTGATTCCACTTCAGTGACTCCAACTCATTTCATGTATTATATTGTTGTGAGTTAGCTCGTTTAGGATACTCCTATTAATTAGCT CCTTATTTTGATATAGTTTTTCGGTACATTTTATATAAGGTTTTTTACACTCCAATTTTTTTCATTTCCTTCTCCATTTTCCACTTCTCATTCTGGGCAC TCCTTCAATCGAAGAGAAAAGCATATTAATAAGGTTTAAATATATTTTATGTTTTTTTATCTAATGTTTAATTTGGTTCTTTATGGG
• Tissue: pods
• Gene name: LI_gene_175403;
• Additional information: details;

Expression of Ll_transcript_499295

FPKM

• PAB: 0.7
• PNAB: 1.5
• PS1: 1.5
• PS2: 1.1
• PS3: 1.4
• PW1: 0.6
• PW2: 2.1
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_499295

• Blastp: ATP-dependent zinc metalloprotease FTSH 5, mitochondrial from Oryza sativa with 85.89% of identity
• Blastx: ATP-dependent zinc metalloprotease FTSH 5, mitochondrial from Oryza sativa with 85.93% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (4326311)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437850.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;