| Id Trinity | TRINITY_DN50205_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_498216 |
| Sequence | CTAGGATTAGATATTAATGAAACATACAGGGGTCAAGAAAAGGCCTGGTTGTAGCTGGGTCCAAGGAAGAGAAGGCTTTGCGACCTTCTATGTGGGGGAC CGATCTCACTCACAATCTCAGCAGATATATGAAATACTTGCAGACTTGATTCAATCCATTAAAGCCATTGGGTATGTTCCACAGACAAGCTTTGCTCTTC ATGATGTAGATGATGAAGAAAAGGGTGACTTGCTTTCTGAACATAGTGAAAAGTTGGCTCTTGCCTATGGCATCCTAACATCACTTCCAGGGACACCGAT TCGAATCACGAAGAACTTACGCATTTGTGGTGATTGTCATAGTGCCATAACTTACATATCCATGATTATTGATCACGAGATCATACTAAGAGATTCAAGT CGCTTCCATCATTTCAAAAACGGATCCTGCTCATGCAAAGGGTACTGGTGAGAATGGAGTCAAGCAAATCCATTTAATGTATAACATTTTTGCAATGACA GGTAATGATCCCTTTGAGTACTGTGACATTGTCACAACAACAACCAATAGAATTTGACCGGTCCTAGAGCCGGTATGATCTTTGACAGTTTTATGGAAGG GACATAAACCACCTAAGAAGGGCCGGACTGAGAATGCAGTTTGTGATCTTGAAGACAATCAACCTCACAGTGTTCCCCTCACTTTTTCTGGGTGGTCCTC ATTCCTCACAATCACCAGAGTGGTTCCAACGTGGCTTTGAAACAGTCCATGACACCTGAAATCAAGGTATACGCCAAGCAAGTTAAGGCCACTGCAGTTG CGCTTAGAAACTACTTGACTACAGTCCAGTCATTGGTGGAGGAACTGAGAACCATGTTGTGTTGTGCGATCTCTACCTTCTCGGCTTAACCGGCAATGAG GTCGAGAAACATTGTGATCTCTGTAACATTATTATGAAAATAAATGCTGTTTTTGGCGATAGCAATGCATTGGCTCCTGGAGTAGTAAGGATTGGTAAGA ACTCCACTATGAACTTGAATTTGTTATTGTGAATATAATTTTTTTTATACACTGATGTAAACTTGAAAGTAAATACAAACTTTCTAACAAAGTTATGCCA GATTTTTATACAGCCATTTTATTTCTGCTTTGTAAGGGGAAGAGAGAGTGTACTACTTGGGGTTTGAAGGAATTTGATTGAGGATGTGTTTTAATGTTTT ACCAAAGGAGTATTATTAGTTAGTTCTAGCCCAACATGCAGGGAGGCATGGTTAATCATTTGGAACATGGCACAAATTTTTTCTTTCATTGCATTAAATG AAGATGATAGCATTAAATGAAGATGATAGCATTAAATGAAGATGATAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_175424; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498216
| Blastp | Pentatricopeptide repeat-containing protein At5g16860 from Arabidopsis with 74.31% of identity |
|---|---|
| Blastx | Pentatricopeptide repeat-containing protein At5g16860 from Arabidopsis with 74.48% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G16860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420641.1) |
| Pfam | DYW family of nucleic acid deaminases (PF14432.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |