Ll_transcript_498220

• Id Trinity: TRINITY_DN50205_c1_g1_i4
• Name Transcript: Ll_transcript_498220
• Sequence: AAAGGATAAAGCTTGTTACAAAAAGTAGAGCATTTCCTAAGCTTGGTTATGGAGAAGCTGGTTCTACACTCTCCTTCTATTCCCACTCCCACACCACAAC AACAGTTCCTCTTTCATAACTCTCTCTTCCCATCTTTCAAATCTCGAACTCCATTCCACCAAACTTCTTCATATCTCTCTTGCATAACCACCACTAGAAG AAACCCTCACTTCCAAGCACTCGCCAATGGTGATGCTGAGATTGTCGATGATGAATTGTCCTTTTTGTCCCTCACTGGTAAGCCTGATAGAAACTTGGCC TTGCTCGATGATTATGAATCTGATGAGCTCGATTTTGATTCTGACCCCAATCACCGAAGCGGATATGTGGCTTTACTTGGCAAGCCAAATGTTGGGAAGA GCACATTAGCAAATCAAATGGTTGGCCAAAAGTTGTCGATAGTGACAGATAAACCTCAAACAACAAGGCATCGGATTCTTTGTATTTGTTCCAGCCCAGA TTATCAGATGGTACTTTATGACACACCTGGTGTTCTAAAGAAGGAAATGCACAAGTTAGACTCAATGATGATGAAAAATGTTCGAACTGCCGCTGTTAAT GCTGACTGTGTGTTGGTTGTTGTTGATGCATGTAAAGCACCTGAAAAAATTGATGAATTGTTAGAAGAAGGCATAGGAGACCTCAAAGAAAAACCCCCCA CTCTACTGATTCTGAACAAGAAGGATCTTATCAAACCTGGCGAAGTTGCAAAGAAACTTGAGTGGTATGAGAAATTTACAGATGTTGATGAAGTTATACC CGTTAGTGCGAAATATGGTCATGGGGTTGAAGATGTCAAGGACTGGATACTGTCAAAGCTTCCCCATGGACCAGCTTATTATCCAAAGGACATTGTCAGC GAACACCCTGAAAGATTTTTTGTAGCTGAAATTGTTAGAGAAAAGATATTTATGCAGTATCGAAATGAAATTCCCTATGCATGTCAGGTGAACACTGTAA ACTATAAGGCTCGTCCGGATGCAAAAGATTTCATACAAATGGAGATTTTGGTTGAGAAAAGCTCACAGAAGATTATCCTTATTGGAAAAGAAGGAAAGGC TTTGAAACTGCTTGCTACAGCATCCCGTCTCGACATTGAGGATTTCCTACAGAAGAAAGTTTATCTTGAGATTGAAGTGAAAGTTAAAGAAAATTGGCGA CAAGACGAAGCGCTTCTTAAGAACTATGGTTATGGGGGTCAGATACGTGTTCTATGATGTGAAGATGCACAGAAAAATTCATCAGACATCTATTGTAAGC ATATGATTTTGACGGACACTAACCCGCTTCCTCTTCTTGTAGGCATGACCAGTGATCCCTATTTAGTAAATGTGAAATGAAAATGTTAAATTGGAAATTT TAGGGTATGTTTGCTCTTGCCATTTTTTTGTTATCATTTCTATAGAAAATAGGAAATATATGAAAAAACATGTATGCCCAGTCATTTTTGTTTTCATTTT CAAGAAATGGACTTTACATTTCAGGAAATATTGAAAACACAAGAATGTCGCCTTCACCATTTCTAAAAAATCATGCCATGTCAATTTTGAGATTATAAGT TATAACCATCATTTGATTCATCAACATCTATTTCTCATGTGACCCAAATGTAACACTTTTCTTTCACCCATTTATGGCTAATATCCACCATCCGTGGCTA ACTAGCTTCCAAACTTTTCACTCTTCCTCCAACAAGCTTCAGCAACCCATTCGAAAGCAATTTGTTTTAGAAATGTTTCGCTCATCTGTCCTCCAAGCAA ACTACATAATTCTTCTCTCTTGGACCAAACATAAGAGGATTACTCACACGTCCATGGTGAAAGGACTGGGTGGCATAAGAAGATTCGTTGCGGATGGTTG TCACCTGCATGGAGTTATCGCGTAATGAATGTGGGTGGTGTGCATCGGGTTGGCAGATAGATAATGGTATGGGGCAGAGGATGTTCTGATAATGAGTGTT TGTGATAGGCAATGGTTGTTGATGGATGTGGGGAGCAATGATTATGAAAATTGTAGTAGTTGTGAATGACGAATGGCTAATGGCCTGATTTGAAGGTTGA AGTGAAAATGAGTTTACTATGAAGATAAGGTTTGAAATTGGGAATTTTGTTGCTCGGTTCTTTTTTGGGAATGAGTGTTTGTGATGAATTGTATATGAAG TTTTATTAAGTTATTTGTGAAAGTAAAATCAAATGAGCATGATATGATGGC
• Tissue: pods
• Gene name: LI_gene_175424;
• Additional information: details;

Expression of Ll_transcript_498220

FPKM

• PAB: 4.1
• PNAB: 11.2
• PS1: 10.2
• PS2: 7.8
• PS3: 10.5
• PW1: 10
• PW2: 9.7
• PW3: 10

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498220

• Blastp: GTPase ERA-like, chloroplastic from Arabidopsis with 76.92% of identity
• Blastx: GTPase ERA-like, chloroplastic from Arabidopsis with 76.92% of identity
• Eggnog: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (By similarity)(COG1159)
• Kegg: Link to kegg annotations (AT5G66470)
• CantataDB: Link to cantataDB annotations (CNT0000167)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432261.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;