Ll_transcript_498225

• Id Trinity: TRINITY_DN50205_c1_g1_i7
• Name Transcript: Ll_transcript_498225
• Sequence: GGAAAAGAGAAAATATTTAAAATTGAAGGAGGACATCATCAAATGTTTGATATGAAAACCATATCTCAGTTAAGGTTTGTATTTTAAATCGTTGATGTCT CCCGCCGCCACTACCTCACCTCAACCGCCACCTCTCCACGGTTAGCATGCTCTTGCGCCGCCGTCCATTAAACCCCAACCCATTTCCACCACTCCTCACC ACCACTCAAATCACCTCCTCCTTTTCCACCACCACCCCTCCCTCTCCAATCACAATCACACCAACCCTCTTAAAACAATGCAATTCCTTAACCAATGCCA AACTCTTTCACCAACAATTAACCGTTCAAGGCCTTATCAACATTTTCGCACCAAACCTCATAGGAACATTCTTAGCCTTAAACAACACTTCCCATTCCAT TTCACTTATAAACCATTTTCTTCAACCATCTTCATATTATGTCTTTTGGTGGAACCAACTTATAAGGTCTGCTCTTCATCTTGAAGCTCATCATCTTGTA TTGGATTTTTATCATCAAATGAGGGCACGTGGTTGGACACCTGATCATTATACTTTTCCTTTCGTTTTTAAAGCTTGCGGCGAGATAATGGCTTCGTCGT ATGGTGTATCGCTTCATGCTGATGTGTTTCGAACTGGGTTTGAGTCTAACGTGTTTGTTTGTAATGCTGTGGTTGCTATGTATGGGAGGTTCGGCGCGAT AAGAGATGCACGGAAGGTGTTTGATGATTTGTGTTATAGAGGGGTTGAGGATTTGGTTTCGTGGAATTCTATTGTGAGTAGTTATGCGCGGGTGGGTGAT GTTGGTAGTGCGATTAAGATGTTTGGTAAGATGAATGGTAAAGGGTTGGTGTTGCCTGACGCGGTTAGCCTTGTTAATGTGCTACCTGCTTGTGCTTCAT TGGGTGCTTCGTTGCTGGGTAAAGAGATCCATGGTTTTTCTATTAGGAGTGGGTTGGTGGATGATGTGTTTGTGGGTAATGCGATGGTTGATATGTATGC CAAGTGTGGGAAGATGGATGAGGCTAGTATGGTTTTCGAGAGGATGAAGATTAAGGATGTTGTTTCTTGGAATGCTATGGTGACTGGATATTCTCAGACC GGTAGATTTGAAGATGCTCTTTCTTTGTTTGAGAAGATGAGGGAGGAAAATATTGGGTTAGATGTTGTGACGTGGACTGCTGTTATTGCGGGGTATGCTC AGAGAGGGCATGGTTGTGAAGCTCTGGACGTGTTTCGCCAGATGTGCAATTGTGGATCTCGGCCAAATGTGGTCACTCTCGTGTCTTTACTTTCAGGTTG TGCATCTGTTGGAGCATTGCTTAATGGAAAAGAAACTCATTGTTATGCTATCAAATTTATCCTCTACTTCAATGGACACAATACGAGAGACGATCTGATG GTGATTAATGGTCTAATTGACATGTATGCTAAATGCCAAAGTGTAAACATGAGTCGTACAATGTTTGATTTAATATCTCCAAAAGATAGGGATGTGGTTA CTTGGACTGTGATGATTGGCGGGTATGCACAGCATGGTGACGCCAACCCCGCACTACAACTTTTCTCTGAAATGTTCAAAATAGGCAACTCTATAAGGCC TAATGATTTTACATTATCTTGTGCACTCATGGCCTGTGCTCGTATGGCAGCATTGAGGTTTGGTAGGCAAATTCATGCTTATTTGCTGCGCAACAATTAC GATTCAGACAATCTTTTTGTGACTAATTGTCTCATAGACATGTATACTAAATCTGGGGATGTTGATACTGCTCAAATTGTTTTTGATAACATGCCAGAGA GAAATTCTGTCTCTTGGACGACTTTAATGACAGGTTATGGCATGCACGGACGCGGTGAAGATGCTCTCCGGGTTTTTAATGAGATGAGGAATATGGGTTT AGTGCCTGATGGCATAACCTTTCTTGTTGTGCTTTATGCGTGTAGCCATTCAGGAATGGTGGATCATGGGATCAATTTATTTTATAGAATGAGCGACGAT TTTGGGGTTCCTCCTAAAGAAGAGCATTATGCTTGCATGGTTGATCTATTAGGCCGTGCTGGTCGCTTAGGTGAAGCAGTGAAACTCATTAATGGCATGC CCATTGTACCAACTCCAGTAGTGTGGGTGGCCTTGCTCAGTGCTTGTCGGATGCATTCAAATGTGGAAATTGGGGAATTTGCTGCAAATCGATTGTTAGA GTTGGAGTCAGAGAATGATGGGTCATACACATTACTCTCAAACATATATGCTAATGCCAAACGTTGGAAAGATGTGGCTAGGATTAGATATTTAATGAAA CATACAGGGGTCAAGAAAAGGCCTGGTTGTAGCTGGGTCCAAGGAAGAGAAGGCTTTGCGACCTTCTATGTGGGGGACCGATCTCACTCACAATCTCAGC AGATATATGAAATACTTGCAGACTTGATTCAATCCATTAAAGCCATTGGGTATGTTCCACAGACAAGCTTTGCTCTTCATGATGTAGATGATGAAGAAAA GGGTGACTTGCTTTCTGAACATAGTGAAAAGTTGGCTCTTGCCTATGGCATCCTAACATCACTTCCAGGGACACCGATTCGAATCACGAAGAACTTACGC ATTTGTGGTGATTGTCATAGTGCCATAACTTACATATCCATGATTATTGATCACGAGATCATACTAAGAGATTCAAGTCGCTTCCATCATTTCAAAAACG GATCCTGCTCATGCAAAGGGTACTGGTGAGAATGGAGTCAAGCAAATCCATTTAATGTATAACATTTTTGCAATGACAGGTAATGATCCCTTTGAGTACT GTGACATTGTCACAACAACAACCAATAGAATTTGACCGGTCCTAGAGCCGGTATGATCTTTGACAGTTTTATGGAAGGGACATAAACCACCTAAGAAGGG CCGGACTGAGAATGCAGTTTGTGATCTTGAAGACAATCAACCTCACAGTGTTCCCCTCACTTTTTCTGGGTGGTCCTCATTCCTCACAATCACCAGAGTG GTTCCAACGTGGCTTTGAAACAGTCCATGACACCTGAAATCAAGGTATACGCCAAGCAAGTTAAGGCCACTGCAGTTGCGCTTAGAAACTACTTGACTAC AGTCCAGTCATTGGTGGAGGAACTGAGAACCATGTTGTGTTGTGCGATCTCTACCTTCTCGGCTTAACCGGCAATGAGGTCGAGAAACATTGTGATCTCT GTAACATTATTATGAAAATAAATGCTGTTTTTGGCGATAGCAATGCATTGGCTCCTGGAGTAGTAAGGATTGGTAAGAACTCCACTATGAACTTGAATTT GTTATTGTGAATATAATTTTTTTTATACACTGATGTAAACTTGAAAGTAAATACAAACTTTCTAACAAAGTTATGCCAGATTTTTATACAGCCATTTTAT TTCTGCTTTGTAAGGGGAAGAGAGAGTGTACTACTTGGGGTTTGAAGGAATTTGATTGAGGATGTGTTTTAATGTTTTACCAAAGGAGTATTATTAGTTA GTTCTAGCCCAACATGCAGGGAGGCATGGTTAATCATTTGGAACATGGCACAAATTTTTTCTTTCATTGGTAAGGTGAAATTTGTTCTATGATACATATA TTATCTAGATCATATTTGAACAATTGAAATGCCGAAGAAAAAATGTCACATGTTACGTCTAAAAATCTGAAGTGATTTTGTTTATTGGTACTGTATCTTG CATCATCATATATGAACGTTTTATCATGTTATATCGTTTG
• Tissue: pods
• Gene name: LI_gene_175424;
• Additional information: details;

Expression of Ll_transcript_498225

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0.5
• PS2: 0.4
• PS3: 0.4
• PW1: 0.3
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498225

• Blastp: Pentatricopeptide repeat-containing protein At5g16860 from Arabidopsis with 60.33% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g16860 from Arabidopsis with 61.61% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G16860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420641.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;