Ll_transcript_497779

• Id Trinity: TRINITY_DN50207_c1_g1_i6
• Name Transcript: Ll_transcript_497779
• Sequence: GTTGACACCTTCAATCATATCACACTAATATACACAAACTCCTTTTTTCACCAAACCAATCTCTCTCAACTACTTTTCCTTCACTTTTCTATTTTCTTTC TTCTTCCCACTTTTCCTGCTTCAAAGGTTTGCTTCACTCATATCTTCTTCTTTTTTGTTACCCTTTAATTATATTTTTGTCTTCTGTTTTCTTTTGTTTA CCCTTCATTTATGTTAGTGTTCTGTTTTGTTTTCTAGTTTCCTGAGAAATATAGTGATTAGTGTTCTTTCTGTAGCTATAGGCTTATTTAATATATTATT TTTTCTACTTTCTATGTTCTAGTGCTTTCAATGTTGTAATTAGGCTTGTGATTTCAGTTAACAGCTTTATTTTCAATGTGCTTTAATAGAACCAGACTGA ATATATTAAAAAGTATTAACCCCTAAACATAGTCTGAGATAGCATCACGTTTCATAAAATTTTGTTTATGCTTGAAAAAATGTTCAGATCAGTTTAATTT GCTTTACTTGAACATAAATTGTAATCTCTAAGCTTAATTATGAGTAGGCGTTTGATTCTTTTTGGTTACTTCTTTTTATGACAGGACACTCTTCAACAAA GCGATGTTGTTTTTGTTGTATAGAATACCATGAATTTACTCTGTTCTTATCTTATAAAACATAGAATTTTTGTATTATCATATTATCATGTTCTATGTAT TAGTCTTCTACTTTATTATTCTTCAAGAAATTGACTATTTTTCATTGTTCACCCAGGTTTCCTTTTAAGACATTGATCCCATTTGATATTAAAATCTGTG CTCCAACTTCTAGTACTGCATTCAGTCATGACTTGTTTTCCTTTATTATTTGGTAAGAAGGTGTCTTCTGTAGCTAAACGAGATCCAGACATCAATGAAG GTAACTTAACTACACTCTATATATCAAATAACCAAGATAATACTACAATGGATTTGTTCAAGATTGCTAATTGTGAACAACTAAGGAATGTTGTTGTATT CTGGAATTAATAGATAATGTTATACTTGTCAACAGAATTTCCAGGCCTAAAAAATGTAAGGATCTTCACCTACAAAGAACTAAGAAACGCCTGTGACAAT TTCAGTTCAGCCAATAAAATCGGAGAGGGCGGTTTTGGTTCTGTCTATAAGGTAACTAAACCACTTCAAGTATTGCTTCCATCATAAGATCAATTGCTGT AATCATTAGTTTTTGATTACATTCCTTATCAATGAAACGCTAACACGTTACGGTGGATGATCAGGGATTGCTGAAAGATGGAAAGGTTGCTGCTATAAAA GTTCTTTCAGCTGAATCAAGACAAGGGGTGAGGGAATTCTTGACAGAGATTAATGTGATCTCAGAGATAGAGCATGAATATTTGGTTGAGTTGTATGGTT GTTGTGTGGAAGGAGATCAAAGAATATTAGTCTACAAATACCTCGAAAACAATAGCCTTGCACAAACCCTTCTAGGTAATGAATGCATTATAATTTTTAT GTGGAAAGCTATCTGTGTTTTATCTCTTAAAATCTATTTGGATCATGTTTTGATAAAGTTTTCTGTGTAAATTTGAAAAGAAAGGCTTGTATTATATAAT TCAAATCATCTTTGCCTTTAAAACATACCACAGTTCCTTTTGAATCATTATGTTTACTTGCAGGAGGGTACAGTGATATCCAGTTCAGTTGGAGAATACG AACAACGATATGCATCGGGGTTGCCCGTGGGCTCGCCTTTCTTCATGAGGAAGTAAGACCACATATTGTTCATAGGGATATAAAAGCAAGCAATATTCTG CTTGACAAAGACCTTATGCCCAAGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCATCACACTTGACTCATGTTAGCACCAGAGTAGCAGGAACAATAG GTTATTTGGCACCAGAATACGCAATAAGGGGGCAGTTAACACGAAAAGCGGATATTTACAGTTTCGGTGTCCTCCTTGTGGAGATAGTTAGTGGGAGATG CAACACAAATGCACGTTTACCAACAGGAGATGAATATATTCTGGCAAAGGTATGTTTGTCCTATGTTCCTAGTTGTATTGATATTCCAACTAAACTTAAA GTCCTTACAGACCATATTCTACAGCATTATATGAGACTTTTGGACCAACGCTTATATAACATTCTATCCTTGCAGACATGGGAGCTTTATGAGCAAGGGG AATTGATAAGGCTGGTAGACATATCACTAAACGGATTCTTCGATGCCGAAGAAGCTTG
• Tissue: pods
• Gene name: LI_gene_175445;
• Additional information: details;

Expression of Ll_transcript_497779

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0.4
• PW2: 0.2
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497779

• Blastp: Cold-responsive protein kinase 1 from Arabidopsis with 54.79% of identity
• Blastx: Cold-responsive protein kinase 1 from Arabidopsis with 61.08% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G16670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432372.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;