| Id Trinity | TRINITY_DN50208_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_496748 |
| Sequence | CTTGAATTTCACACAAACTCTGACAACATCTACACTCACATGGCCCCTTATTAAAATAACTCTATAAATTTAGAAAAGAAAAGTTTAAAAAAAAGTTAAG CTAGAAACAAGAAACAAGAAACAGAAACAACTTAACCCAATCTATTATTATCTTGTTCTACACATGTTGTTGTAGCAGTTTCTATAAAAAGCTGGAAGCC AATAATAAATGGAAGGAAAGGAAGAGCACTGAATATAGAACAGAGATTTAAGAGCATAGAAGAGAAGAGAAGAAAAAATCAAAGATGAATGCTTTTCAAT TTTCAAGTTAATATTATATTGTTAGAACCAATGATGGATAAGAAGAGATGGTTATGGAAGCGAAAGTCTTCCGAGAAGTGCCCTGGTGAAACTGAAAGTT CAGGATCTGTGTCATCTCATTCTGAGAGATACTCAGATGAACAGGAAGAACCAAAGGAGTCTTATAATGGAAGCAATAACTCACCCGATGTCACCTCAAA AGCCGGAGCCTGTGATGATGATGATAATGTTAGTTCAAATGTCAATGCACAATTTCCTGAAGAAGTCATCTCAAAATCTGTACCTACTACTGGCATCAAG GATGATGGTTCACTAGAGAGCAATGGAAATGGAGAAAATGAAAATATAAAAAATTTAAAGGATGGTCATCTAAATGATGGATTGAAGAATATGTCGGAGA AGCTATCTGCAGCGCTTGTAAATGTCAATGCCAAAGAAGACATGGTTCAGCAGCATGCCAAAGTTGCTGAAGAAGCCATTGCAGGTACAACTAATGTCAT TAATAATCAGCACAGTCCTCTTTTGCTTTCTTTAGTTTTCAAAATAACCACTGATATTGCTTGATTATCATTCCATCCTTCCTAGCTTCCTTGGGCATGC ATCAATTCTATCAGACTTGTCTAAAAAGGGCAGCCCGGTGCATGAGGCTCCCACCTGGTGATGTTCGGGGAGGGTAGATATGCGCAGCCTTACCTCCGCA AATGGGGAGACTATTTACATTAGACTTGTCTCTACAAAACAAGTCAGCTGATTGTTGAACAATCAAACTGCACAACAGAAGTTCATATTCCTGAAGGAGG GTTGAGTAGGGTTTATGGGGATTAAATGTCAAATTGCATCTGAATTATGTCACTAGTTTATTAAGAGACTCATATATGATCTATCATAAGGCGTACATGC TGACACTATCGTAATGATTATCTCCTTGTTTAATTATGTGATATAGTGTTTTCCTTTTGTTTCTCTTTCTCCCTTTTTAAGATTGTGATTGTGCCATTTT CGTTAACTCAGGTTGGGAAAAGGCTGAAAAAGAAGTGGCAGTATTGAAGAAGCAACTTGATGTAGTCACTCTAAGGAATTCATCTCTGGAAGATCGAGTC GCCCATCTAGATGGTGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGAGAAGAGCAAGAACAGAATATCCATGATGCTGTAGTGGAGAAAAATC TCGACTTGGAATCAACCAAAGTTGAACTTGAGAACAAGCTCATTGAGCTTCAGAACAGATTAGATGCTTCTAATGCCATATCATCTATTGATATTGGTAT CTCTAGAAAGGTTGAATATTTGGAGAAAGAGAACATGGCTCTTAGGCAAGAGCTCCTAGCTAAATCAGAAGAGCTGGAAATCATGACAATTGAGAGGGAT TTATGCACTCAATCTGCTGAGACAGCTAGCAAGCAACATTTAGAAAACATTAAGAAAGTCGCTAAACTTGAGGCTGAGTGCCGGAAACTAAAAAGCATTG CTTCTAGAGCTTCTTATGTTCATGATCACAAATCCATTACTGCATCCTCATTTTGTGTTGAATCTCTCACAGATAGTCAATCAGACAGTGGTGAGCGGCT TATGCCAGTGGAGATTGACGCTCAAAAGATTAGTGGCTCAGAACTAAACAACTGTGAGCCAAATTGTCCTGACTCATGGGCCTCTGCACTAATTGCTGAG CTTGATCAGTTCAAGAGTGAAAAGTGCAGACAACAAACCCAATCTAGTTCCGCCAAAATTGATCTTATGGATGACTTTCTTGAAATGGAACGACTTGTTG CACTGCCCGAGACTAAGAATATAAACCTTGTCCAAGAGTCAGTTGTTGCCAATCAATGCACTAATGAAGAAATCACTCTCAGAGTGGAATTTGAGACCAT GAATCAACAAATGGAAGAGCTAAAAGACAAGTTAGAGAAGATAGAAGCAGAAAAGGCTGAATTAGAGATAGCTTTGACGAATAGTGAAGAGTGTATCGAG GAGTCACAACTTCAGTTGAGGGACGCAGAAAATAAATTAGAGGAGATGCAAAGAGAGCTGAAAGATGCCTACAAATCAAAGCAAATAGTAGAAAATTACT TATTGAGCATGGAGGCAGATGCTCAAACACTATATGCAAAGGTTGATCTATTAGAAGCAGAGGTTGTTCAAGAGAAGGCTTTGTCAGATGAAATTGCAAT GAAGTGTAAGGACTTAGAGGAAGAGCTAGAAAGAAAGTCTGCAAAGGTCGGCTTATTAGAAGCAGAGGTTGATAAAGAGAGGGCTATGTCGGATGAAATT GCAATGAAGTTTAAGGACTTGGAGGAAGAGCTAGAAAGCAAATCTGCAAAATTCGACTTGTTAGAAGCAGAGGTTGATAAGGAGAAGGCTGTGTCAGATG AAATTGCAACTAAGTGTAAGGACCTGAAGGAAGAGCTAGAAAGCAAATCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175451; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_496748
| Blastp | Filament-like plant protein from Lycopersicon with 49.7% of identity |
|---|---|
| Blastx | Filament-like plant protein from Lycopersicon with 51.58% of identity |
| Eggnog | filament-like plant protein(ENOG410YAAZ) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430548.1) |
| Pfam | Filament-like plant protein, long coiled-coil (PF05911.10) |
| Rfam | - |
| GO | - |