Ll_transcript_498245

• Id Trinity: TRINITY_DN50209_c0_g2_i1
• Name Transcript: Ll_transcript_498245
• Sequence: TTCTGTCACAGTTTCACTCTCATTCCTTTCTCTCGCTGATTTTTCTTCCGACGTCTCACTCCGTCTTTCAATGGAAACTCCTCCAGAGTCGGCTACTGCC GCCGCCGCCGGCGAAACCATAAGCAAAAATGCATTGAAGCGGGAACTGAAGAACAAGCAGAGAGAAGAGGAAAGGAAGCGCAAGGAGGAGGAGAAGGCTA AAAAGGCTGCTGAACTGCAACAAGCTAAAGCTAACAGCAAATCTGCATCTGCTGCTGATGAGGATGATATGGACCCAACGCAATACCATGAGAATAGGCT AAAGTATCTTGCAGCTCAGAAAGCAGAAGGCAATAACCCATATCCTCACAAGTTCTTTGTCACACTCTCTATTGATCAATACATCAAGAAATACGAAGGG TTAAGCGATGGGGAGCACCTTGAGGACATCTCTGTCTCCTTGTCTGGCCGAATCATGCACAAACGTGCTTCTGGTGCAAAGCTTGTCTTTTATGACTTGC ATGGTGGTGGTCTCAAGGTCCAGGTTATGGCTGATGCAAGGAAATCGGACTTGGATGAGGCTGAATTTTCAAAATTCCATTCTAATGTGAAGCGTGGTGA TATTGTTGGTATCACAGGGTTTCCAGGAAAAAGTAAGAAGGGTGAGCTCAGTATTTTTCCGAGGACTTTTGTATTGCTGTCTCATTGTCTGCATATGATG CCAAGACAAAAATCTGCTGCTGCTGCTGCCGATAATGCAAATTTGAAGAAAAATCTGTGGGTTCCTGGAAGTACCCGGAATCCAGAAACATACATTTTGA GGGATCAGGAAACACGATACCGGTTACGTCATTTGGATCTGATGCTTAATCCAGAGGTTCGAGAAATATTCAAGACTAGGTCTAAAGTTATTTCTTACAT TAGGAGGTTCCTCGATGACCTTGATTTCTTGGAGGTTGAAACACCTATGATGAACATGATTGCTGGTGGAGCAGCAGCTCGTCCATTTGTAACTCATCAT AATGATCTTAACATGAGGTTGTTCATGCGAATTGCTCCTGAACTCTATCTTAAGGAGCTGGTTGTTGGTGGTATAGATCGTGTTTATGAAATTGGCAAAC AATTTAGAAATGAGGGTATAGATTTGACTCATAATCCTGAGTTCACTACCTGTGAGTTCTATATGGCTTATAAGGATTACAATGATTTGATGGAGATAAC AGAGCAAATGTTGAGTGGCATGGTTAAGGAACTTACAAAAGGCAGCTATAAAATCAAGTATCATGCAAATGGGATTGATATGGATCCTATTGAAATTGAC TTCACTCCACCTTTCAGGAGGATCGACATGATTGAGGGATTAGAGAAGATAGCAGGCCTCAGTATTCCGAAAGACTTGTCGAGTGATGAAGCTAATCAGT ATCTGAAGGATGCATGCTTGAAGTATGAGATCAAATGCCCTCCTCCTGAAACAACCACACGTTTGTTGGATAAACTTGTGGGGCACTTTTTGGAGGAAAC TTGTGTAAATCCTACATTCATCATTAATCATCCTGAGATAATGAGTCCTTTGGCAAAATGGCACAGATCAAAACCAGGCTTGACTGAACGTTTTGAATTG TTTGTTAATAAACATGAACTTTGCAATGCGTATACCGAATTGAACGACCCTGTTGTACAAAGACAGAGGTTCGCTGACCAACTCAAGGATCGGCAATCAG GTGATGATGAAGCAATGGCCTTAGATGAAACATTTTGTACGGCCCTGGAGTATGGTTTGCCGCCAACCGGTGGCTGGGGTTTGGGCATTGATCGGTTGAC CATGTTGCTGACTGATTCACAGAATATTAAGGAGGTTCTTCTTTTCCCTGCCATGAAGCCTCAAGAATGAATCTTCAATCAACACTTTGAGTTCTCATTT CATCCCATTGAATAGGTATATCATGCTTATGTCATTAAACATCCGTACTTATTCATTGTACATGTTTAGGGAAGTATAGGCAAGGTGCTAAGGTGAGAAA GTGACCTTTTTTTGTAAGGTGAGAAAGTGAGGTCGTATCCACATTGATTTGACCTACTGTATAGAAATCTCATCCCCCATTAAATGATCCAATAGGTGAT ACTAGAAATTCAAATTGTGGACTGCATGTGATTCGGCTACAATATTATTATGATTGCAGTGACCGTCGCAACCGTGTCACACCACAATTGCATTGTGATA CCGAACCACAATGCTATGGCTGCATCGGATCATATCGATTTAAAAGATATTTTTCATCCAAAATATTTAAAACCCGGACCACAATCGTGACTGCTATTTA AAACCCGGACCACAATCGTGACTGCTATTTAAAACCCTAGTCGTTACATCGTCACTTTCTCACTTTTGCCAATGATCCATTGAGGATGGGGTGCGACCTG CTCATGTTAGTTTGTGTTATAATCCTTTTTTTGGGTGGAACTTTAAGGGTATGTTTGGGAGTCGTGAGGGGAAGGGAATGAAAGGGATCAAAGAGTTAGG AAGGGAGAGGAAGGGATGGGAAAATGAGGGTTATCCTTTCCATTGTTTGGGAGTACAAATTTAGATGAGGGATGGTTGACTAATGATAATGTTAGATTTT TTTTTATTTTTCCTTCAAAAATATAATTATCACTGAAAAAATAGAATAATATATAATTATATAATATTA
• Tissue: pods
• Gene name: LI_gene_175456;
• Additional information: details;

Expression of Ll_transcript_498245

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.3
• PS2: 0.7
• PS3: 0.7
• PW1: 0.2
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498245

• Blastp: Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 76.05% of identity
• Blastx: Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 77.38% of identity
• Eggnog: lysyl-trna synthetase(COG1190)
• Kegg: Link to kegg annotations (AT3G11710)
• CantataDB: Link to cantataDB annotations (CNT0001053)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431528.1)
• Pfam: Domain of unknwon function (DUF3824) (PF12868.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;