Id Trinity | TRINITY_DN50209_c0_g2_i11 |
---|---|
Name Transcript | Ll_transcript_498257 |
Sequence | AATTGTTTGTTAACAAACATGAAGTAAGATGTTGAGTTTTTGGTGATTATTAATTATTTAAAAACCATTTAATGGATTTATGCATGTGTTCTGATTACTG TTTCTGGTACCTTTCAGCTTTGCAATGCATATACTGAATTGAATGATCCTGTAGTACAACGACAGAGATTTGCTGATCAACTCAAGGATCGGCAATCAGG TGATGATGAAGCAATGGCATTAGATGAGACATTTTGCACGGCCCTGGAGTATGGTTTGCCACCAACTGGTGGTTGGGGTTTGGGCATTGATCGGTTGACC ATGTTGCTGACTGATTCACAGAATATTAAGGAGGTTCTTCTCTTCCCTGCAATGAAGCCCCAAGATTGAACATGGTGTTGTCATTTGGTCCATTAAAAGC ATCCTTCATAGGTATATTATACTTTTAGTCATAAACCATGCACACTTACTGATTATGTGTTTCCTTTCAATGTAGCCCAGTGCATACCTTTCTTTTTCAA TGAATAGAAGAGCCTAGAAAAGTTATGTTTTTTATTCTCTGATTCACACACCTGGGAAGAGCTTGTGAGTCGGTCCATTAAACTTTACTTGTATTAGTGC TTCATGTTGCCATTAATTTGTTTGTGATAGTTCTATTTTTCTTTGGGACAAGCTCCTCTAAAGTCTAAAGTGAGTTTTTTTAAGGTGAGAAAGTGAGGGT GTATCCACACTTGACTCAACCCACTAAAGGATTCAATGATAACCATAGATACATCCTCACTTTCTCACTTTCTCACTTTAGAGAGATGCTCACATTTGAG GTCTTTTCTCCTTTTTCAGACATGCTGTGCATGTTAGTTTGTGTTATAATCCTTTTGTTTTGGGGTAGCTTTAAAGGATTGGTTTTCTTTTTTCCTTTTC ATTTCAGGAACAGGAAAAAATCATGATGGATCTCAGTTTTGATTTTTTTTATTTGGTATGTACTGCTCAAGCAGCATCTACACTTTTTGTTTTAAGGGCA GATGGAAGAGTTTGTATACTCTATTTTATTTGATTCTTTTGGTGATCCCGTTGAGTTTTATGTCATATACCAATTTATTTATTATATATTAGTGATAATA GTTATATATACATTGAGAAAAAGATATATTCACTGACAACGTAATTGCGTAAGAGATTTTTATAATGTTACTGTATTATCTATCATTCATTTTTAATAGT TGACTTTTAAATGAAATTAAATAAAAGTAATATAAATGA BLAST |
Tissue | pods |
Gene name | LI_gene_175456; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498257
Blastp | - |
---|---|
Blastx | Lysine--tRNA ligase from Oryza sativa with 95.24% of identity |
Eggnog | lysyl-trna synthetase(COG1190) |
Kegg | Link to kegg annotations (4333345) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_012569045.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |