Ll_transcript_498262

• Id Trinity: TRINITY_DN50209_c0_g2_i15
• Name Transcript: Ll_transcript_498262
• Sequence: GTTTTATTAAAACCCTAGTTCTTCTATCTGTCATATCACTCACATTCGCTTCTCTCGCTCATATTCTTCCGCCGGCGACTTCACTTTCTCTTACGATGGC AACTCCACCAGACCCGTTGGCTACATCCACCACCGCCACCGCCGCCGATGCCGGAGAAACCCTAAGCAAAAATGCATTGAAGCGAGAACTCAAGAACAAG CAGAGAGAAGAGGAAAGGAAGCGCAAGGAAGAGGAGAAGGCCAAAAAGGCTGCTGAAGTGCAACAGGCTAAAGATAACAACAAATCTGCAACTGCTGCTG ATGAGGAAGATATGGACCCAACACAATACCATGAGAACAGGCTTAAGAGTCTTGCAGCTCAGAAAGCAGAAGGGAATAACCCGTATCCACACAAGTTCTT CGTCTCTCTGTCTATTGAGGAATACATCAAGAAATATGGAGGGTTAAATAATGGGGAGCACCTTGAGGATGTATCTGTCTCCTTGTCTGGCCGAATCATG CACAAACGTGCTTCTGGTGCAAAGCTTGTCTTTTATGACTTGCATGGTGGTGGTTTCAAGGTCCAGGTGATGGCTGATGCAAGTAAATCAGACTTGGATC AAGCTGAGTTTTCTAAATTCCATTCTAATGTGAAGCGGGGTGATATTGTTGGTATCACTGGATTTCCAGGAAAAAGTAAGAAGGGAGAGCTCAGTATTTT TCCAAAGACTTTTGTATTGCTGTCTCATTGTCTGCATATGATGCCAAGACAAAAATCTGCTGCTGCTGCTGATAATGCAAATTTGTTGAAAAATCCGTGG GTTCCAGGAAGTACCAGGAATCCGGAAACATACATTTTGAAGGATCAGGAAACAAGATACCGGTTACGCCATTTGGATTTGATGCTTAATCCAGAGGTTC GAGAAATATTCAAGACTAGGTCTAAAGTCATTTCTTACATTAGGAGATTTCTTGATGACCTTGATTTCTTGGAGGTTGAAACACCTATGATGAACATGAT TGCCGGTGGAGCAGCAGCTCGCCCATTTGTAACTCATCACAATGATCTTAACATGAGGTTATTCATGCGAATTGCCCCTGAACTCTATCTCAAGGAGCTT GTTGTTGGTGGGATAGATCGTGTTTATGAAATTGGCAAACAATTTAGAAACGAGGGTATAGATTTGACTCACAATCCTGAGTTCACTACCTGTGAGTTCT ATATGGCTTATAAGGATTACAATGATTTGATGGAGATAACAGAGCAAATGTTGAGTGGCATGGTTAAGGAACTTACTAAAGGCAGCTACAAAATCAAGTA TCATGCAGATGGGATTGATAAGGATCCTATTGAAATTGACTTCACTCCACCTTTCAGGAGGATTGACATGATTGATGAACTGGAGAAGATAGCAGGCCTC AGTATTCCGAAAGACTTGTCGAGTGACGAAGCTAATCAATATCTGAAGGATGCATGCTTGAAGTATGAGATCAAGTGCCCTCCTCCTGAAACAACTACAC GTTTGTTGGATAAACTTGTGGGACACTTTTTGGAGGAAACCTGTGTAAATCCTACATTCATCATAAACCATCCTGAGATAATGAGTCCTTTGGCAAAATG GCATAGATCAAAACCAGGCCTGACAGAGCGTTTTGAATTGTTTGTTAACAAACATGAACTTTGCAATGCATATACTGAATTGAATGATCCTGTAGTACAA CGACAGAGATTTGCTGATCAACTCAAGGATCGGCAATCAGGTGATGATGAAGCAATGGCATTAGATGAGACATTTTGCACGGCCCTGGAGTATGGTTTGC CACCAACTGGTGGTTGGGGTTTGGGCATTGATCGGTTGACCATGTTGCTGACTGATTCACAGAATATTAAGGAGGTTCTTCTCTTCCCTGCAATGAAGCC CCAAGATTGAACATGCCCAGTGCATACCTTTCTTTTTCAATGAATAGAAGAGCCTAGAAAAGTTATGTTTTTTATTCTCTGATTCACACACCTGGGAAGA GCTTGAACAGGAAAAAATCATGATGGATCTCAGTTTTGATTTTTTTTATTTGGTATGTACTGCTCAAGCAGCATCTACACTTTTTGTTTTAAGGGCAGAT GGAAGAGTTTGTATACTCTATTTTATTTGATTCTTTTGGTGATCCCGTTGAGTTTTATGTCATATACCAATTTATTTATTATATATTAGTGATAATAGTT ATATATACATTGAGAAAAAGATATATTCACTGACAACGTAATTGCGTAAGAGATTTTTATAATGTTACTGTATTATCTATCATTCATTTTTAATAGTTGA CTTTTAAATGAAATTAAATAAAAGTAATATAAATGA
• Tissue: pods
• Gene name: LI_gene_175456;
• Additional information: details;

Expression of Ll_transcript_498262

FPKM

• PAB: 0
• PNAB: 1.7
• PS1: 1.6
• PS2: 0.7
• PS3: 1.7
• PW1: 1
• PW2: 0.8
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498262

• Blastp: Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 76.26% of identity
• Blastx: Lysine--tRNA ligase, cytoplasmic from Arabidopsis with 78.12% of identity
• Eggnog: lysyl-trna synthetase(COG1190)
• Kegg: Link to kegg annotations (AT3G11710)
• CantataDB: Link to cantataDB annotations (CNT0001053)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439359.1)
• Pfam: OB-fold nucleic acid binding domain (PF01336.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;