| Id Trinity | TRINITY_DN50211_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_498074 |
| Sequence | ATTTTCTTCACTCACTCTGAACAATATAAGTACAAGTACAACACCCTCATTTTCAACATATACTCTTCACACATTCATTGAATAGAGTACAACAACAAAA CCTCTTCTCTTCTCGAAATATAAGGATGGAGGGGTTAACAACAAGAGGAGGAGGAGAAGGGTTGAGACATCTATTTATGACAATGTTTCTAACAAGCTTT GGTGGTGTCATAGTGATTCCGGCAATGACCGATGTAACATTAGCAGCACTTTGTCCTGATCAAGATCAATGTTCCCTTGCCATCTACCTCACTGGCTTCC AACAAGCCATGACAGGAATGGGATCAGTGGTGATGACACCATTGATTGGAAATTTGTCAGACCGGTATGGCAGGAAAGCTTTGCTTACACTTCCTCTTTT ACTTTCTGTCATTCCTCATGTGATATTGGCATATAGCAGGGATACCAACTTCTTCTATGCTTACTATGTAGTCAAAACTCTTGCTGCCATGGCAGGTGAA GGCAGCTTCAACTGTCTGGCTCTTGCATATGTGGCTGACAATGTTCCAGAAGGGAAACGAGGTTCGACATTCGGAGTACTTTCTGGTGTAGGATCAGCAT CATTTGTAGGTGGAACACTAGCTGCTCGTTTTCTATCCACTGCTTTGACATTTCAGGTTGCTGCAGTGTTTTCAATGATTGCATTGGTGTACATGAGAAT TTTCCTTAAGGAAAGTGTACCTGGAGCTGGAGGTGGTGCCATGACAAAGCCTTTATTGAAAGAGGGCCAAGAACCATGCCTTCAACAGTGTGAGGGTGAC TCATCAAATATAACAACAGGAACATTTAAGAAACTTCCTTCAGTGGGGGATTTAATTTCTATGCTCAAGTGTAGTACTACATTTTCACAAGCAGCAGTTG TTTTGTTCTTGAATAGTCTTGTAGATGGGGGGTTGATGGCTTCATTGCTGTATTATTTAAAGGCGCGATTCCAGTTCAACAAGAACCAGTTTGCTGATTT GATGATGATTACTGGGATTGGAGCAACTCTTACACAGATATTTTTTATGCCCATATTAGTACCAGCTGTAGGAGAGGCCAAGTTAATTTCCATGGGGCTC TTAGTTAGCTGCATAAGTATGTTTGTCTACAGCATATCATGGGCAGGATGGGTTCCTTATGCTCTTGCTGGTTGTTCTATTTTCGGTGTTTTTGTGCGCC CAAGTATTTGCAGCATTGCATCGAAGGAAGTTGGAACTACTGAACAAGGAATGGTTCAAGGATGTCTTTCAGGAATTAGTTCCTTAGCCAACATAATTTC TCCGTTAATTTTCAGTCCGCTGACAGCCCTGTTCCTGTCAGATGAAGCACCATTTTCTTTTCCTGGATTCACTCTAATGTGCCTTGGGCTAGCACTGGTA ACACTTTATCAGAAAGAAAACTCATAAACTTATTATACTTTGTCGTAGCTATTTCTTCTTTTTTGATAAGCAAATGTTAGTATGTTAGAATTTTTTAGTG TGTAGGTTTTAAACCCTCGACCTTCTCATTACTACACTCCTTAAACCCCCGCCCTAACCTTGTAATGACTCCCTCATTGCTCTTAATGGAAACTGGTAAG ATTAAGTTTGAACACTAAGATATGGTGAGTTTATATGCCTTTCTAATTTCTCATCACTATCAATGGAAAGTGGTAAAGACCAACATTGAACACTAACTAA TAGCCTCCAACTTGCTAAAAATAGGATTTGGAGAAATTAATATAATCTAGCATCCCAAAAGAATCTATCTTAAAATGAAGCCTTATGTTGAGTTTATTCC TGCCATGATGAAAACAATATCTACCAAAACATATTTTAAGCATGATCCAATTGAACCTTAATCAGGATGCTCTAAAATTGTTGTTAAAATGATAGTAGCA TTGATTTTAAAATTTTCATCAACATCAATTAGTTCTTTCAATGTTCCTTGTTCAGTTGACACTAACATATCAAGCATTGCATTTCAGATGGCTGCATTTT TTCAGAGTCTAATGATCCAGGTTGTTCCTCCTATTGCGGTTTGCAAAACTAGCAGCAATCACTGCACTGAGACCATGGTCTGAGGTGTTGACTACACTAC TAGTTGTTCTGATAATCAACAAACACAATCTTTTTTATGCTTCATACTGCCTCAGAAAAATTGTTGCTCATACTTCATAGCCTATACTAGGATAAATTAG AAAGATAGTGAAAGGATGTAGCCAAAAAAGAGAAAGGTAATAGAAGAAACACATTATAGGTATATATTATAAAGTATGGCTTCTAGGGACAGAAACTACC TACTTTGGCCCTTGGTGATCAAGAGCACTCAGTGAAAAATTTAGGAATTTGAAAGTGAAATTAGTTTGGAAAATAATGATATAATGAACCTTCTGGCATA GCACACATTTCTTTGCAATTATCAAAGGGTATTTCATAGGAACTTCTTATATTTCATGTAATGTAATGAATATAACTTCTGGAGCTAGTGAATTTGAAAC TGTATTGTAATGAGTGGCTTCAATTTGTGTTCCTCACTGTAAAATAAGTAATGTGATTCAAGATTATGTATCATCTTCAGCAAATTCTTAGCTTTATTCC GTAAACCCGGTGAGAGGAAAAGACAAGTGAAAGAAGGAAATGATGAAAATTGATTGTGCCCAAAGTTGAGGTTTAATCATTAATTTATTTAGAATTCAGT TGGCATGCCCCTACCATGTCTAGAAAAAACTTGTAAGGTAAATAAAATGGAAGAAAGAGCATAGTGATGATTGATTGATGAATAGTAGAAGGCCTAATGA TCTCAAAGAATGTACAGAGGCAGTGCAAAGATTCATGTAATGTATTGTAAATTATGAAATTGATGAATAGTAGAAGGCCTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175478; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498074
| Blastp | Hippocampus abundant transcript 1 protein from Homo with 24.38% of identity |
|---|---|
| Blastx | Hippocampus abundant transcript 1 protein from Mus with 24.23% of identity |
| Eggnog | solute carrier family 46(ENOG410ZVCA) |
| Kegg | Link to kegg annotations (64645) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441714.1) |
| Pfam | Major Facilitator Superfamily (PF07690.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |