Ll_transcript_498080

• Id Trinity: TRINITY_DN50211_c0_g1_i5
• Name Transcript: Ll_transcript_498080
• Sequence: CACTTGTAAGCCACTTCTCTCATTTCGTTGAGAGTGTTGCATTTAATATCTCCATCCAAACGACATTTGGAATCTTCTTTATCCTCTCTCTCTCTCTCAC AACTATTTATACAGATTCTCTCATCTTCAAGCACAGAAATTAAGAACTAAAATATATGGATAATAGAGTAAGAGGTTTGAGGCATCTATTTGTCACAATG TTTCTTACAACCTTTGCTGCTGTCATTGTCATTCCACCCATCACTGATGTCACCATTGCTGCACTTTGTCCTCATCAATATCAATGCTCCCTTCCCATTT TCCTCACTGGTTTCCAACAAGCTATGACAGGAGTGGGATCAGTGTTGATGACCCCATTGATAGGGAATTTGTCTGACCAATATGGTAGGAAAGCTTTGCT CACACTTCCTCTTTTACTTTCTATCATTCCTCAACTGATATTGGCATATAGCAGGGATACCAAATTCTTCTATGCTTACTATGTGGTCAAAACTCTTGCT GCCATGGCTGGTGAAGGCAGCTTCCAATGTCTGGCTCTTGCATATGTGGCAGACAAAGTTCCAGAAGGGAAACGAGGATCAACATTTGGAGTACTTGCTG GTGTAGGATCAGCATCATTTGTTGGTGGAACATTAGCTGCTCGTTTTCTATCCACTGCTCTAACATTTCAAGTTGGTGCTGTCTTTTCAATGATTGCATT GGTGTACATGAGAATTTTCCTTGAGGATAGTGTACCTGCTGGTGTTGGCATGACACAGCCTTTGTTGAGAGAGGGCCAGGAACAATGCCTCCAAGAATGT GAGAGTGATTCATCCAAAATAACAACAGGAACATTTAAGAAACTTCCTTCAGTTGGGGATTTAATTTCTATGCTAAAGTGTAGTCCTACATTTTCACAAG CAGCAGTTGTTTTGTTCTTCAGTAGTCTTGCAGATGGAGGGTTGATGGCTTCATTGCTGTATTATTTAAAGGCGCGATTCCAGTTCAACAAGAACCAGTT TGCTGATTTGATGATGATTACTGGGATTGGAGCAACTCTTACACAGATATTTTTTATGCCCATATTAGTACCAGCTGTAGGAGAGGCCAAGTTAATTTCC ATGGGGCTCTTAGTTAGCTGCATAAGTATGTTTGTCTACAGCATATCATGGGCAGGATGGGTTCCTTATGCTCTTGCTGGTTGTTCTATTTTCGGTGTTT TTGTGCGCCCAAGTATTTGCAGCATTGCATCGAAGGAAGTTGGAACTACTGAACAAGGAATGGTTCAAGGATGTCTTTCAGGAATTAGTTCCTTAGCCAA CATAATTTCTCCGTTAATTTTCAGTCCGCTGACAGCCCTGTTCCTGTCAGATGAAGCACCATTTTCTTTTCCTGGATTCACTCTAATGTGCCTTGGGCTA GCACTGGTAACACTTTATCAGAAAGAAAACTCATAAACTTATTATACTTTGTCGTAGCTATTTCTTCTTTTTTGATAAGCAAATGTTAGTATGTTAGAAT TTTTTAGTGTGTAGGTTTTAAACCCTCGACCTTCTCATTACTACACTCCTTAAACCCCCGCCCTAACCTTGTAATGACTCCCTCATTGCTCTTAATGGAA ACTGGTAAGATTAAGTTTGAACACTAAGATATGGTGAGTTTATATGCCTTTCTAATTTCTCATCACTATCAATGGAAAGTGGTAAAGACCAACATTGAAC ACTAACTAATAGCCTCCAACTTGCTAAAAATAGGATTTGGAGAAATTAATATAATCTAGCATCCCAAAAGAATCTATCTTAAAATGAAGCCTTATGTTGA GTTTATTCCTGCCATGATGAAAACAATATCTACCAAAACATATTTTAAGCATGATCCAATTGAACCTTAATCAGGATGCTCTAAAATTGTTGTTAAAATG ATAGTAGCATTGATTTTAAAATTTTCATCAACATCAATTAGTTCTTTCAATGTTCCTTGTTCAGTTGACACTAACATATCAAGCATTGCATTTCAGATGG CTGCATTTTTTCAGAGTCTAATGATCCAGGTTGTTCCTCCTATTGCGGTTTGCAAAACTAGCAGCAATCACTGCACTGAGACCATGGTCTGAGGTGTTGA CTACACTACTAGTTGTTCTGATAATCAACAAACACAATCTTTTTTATGCTTCATACTGCCTCAGAAAAATTGTTGCTCATACTTCATAGCCTATACTAGG ATAAATTAGAAAGATAGTGAAAGGATGTAGCCAAAAAAGAGAAAGGTAATAGAAGAAACACATTATAGGTATATATTATAAAGTATGGCTTCTAGGGACA GAAACTACCTACTTTGGCCCTTGGTGATCAAGAGCACTCAGTGAAAAATTTAGGAATTTGAAAGTGAAATTAGTTTGGAAAATAATGATATAATGAACCT TCTGGCATAGCACACATTTCTTTGCAATTATCAAAGGGTATTTCATAGGAACTTCTTATATTTCATGTAATGTAATGAATATAACTTCTGGAGCTAGTGA ATTTGAAACTGTATTGTAATGAGTGGCTTCAATTTGTGTTCCTCACTGTAAAATAAGTAATGTGATTCAAGATTATGTATCATCTTCAGCAAATTCTTAG CTTTATTCCGTAAACCCGGTGAGAGGAAAAGACAAGTGAAAGAAGGAAATGATGAAAATTGATTGTGCCCAAAGTTGAGGTTTAATCATTAATTTATTTA GAATTCAGTTGGCATGCCCCTACCATGTCTAGAAAAAACTTGTAAGGTAAATAAAATGGAAGAAAGAGCATAGTGATGATTGATTGATGAATAGTAGAAG GCCTA
• Tissue: pods
• Gene name: LI_gene_175478;
• Additional information: details;

Expression of Ll_transcript_498080

FPKM

• PAB: 0.5
• PNAB: 0.8
• PS1: 1.2
• PS2: 1.6
• PS3: 2
• PW1: 1.4
• PW2: 1.7
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498080

• Blastp: Hippocampus abundant transcript 1 protein from Homo with 22.94% of identity
• Blastx: Hippocampus abundant transcript 1 protein from Mus with 23.28% of identity
• Eggnog: solute carrier family 46(ENOG410ZVCA)
• Kegg: Link to kegg annotations (64645)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452706.1)
• Pfam: Major Facilitator Superfamily (PF07690.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;