Ll_transcript_496980

• Id Trinity: TRINITY_DN50215_c0_g3_i1
• Name Transcript: Ll_transcript_496980
• Sequence: CTAGGCCACGTCTTGTTTCGATGAAATGTGCGAGGGGAAAGAGTCCGTTGATGGTTTTTTTTTTTTTTTTTTTTTTTTACTTGTTTTCTAGGTATCTATT CATATTCGTTTTTTATTCTAATTCGAATATTCAAATATATAATAATAATAATACCTTGTTTTGACTGTATCGCACTATGTATTATTTGAGAATCTAATGA ATCCCTGATCCTTTGACCAAATTTAATGTCAAAAATGGAGGAATATCAAGTATATTTAGACCTAGATATCTCTCGCCAACAGCACTTCCTATACCCACTC ATTTTTCGGGAGTATATTTATGGACTCGTTTATGATCATGATTTTAATGGATCTATTTTTTCGGAAAATGTAGATTATGATAATAAATTTAGTTTACTAA TTGTAAAACGTTTAATTACTCGAATGGATCAACAGAATCATTTGATTATTTCGGCTAATGATTCTAAAAAAAATCAATTTTTGAGTTATAATAAAAATTT GTATTCTCAAATAATATCAGAAGGTTTTGCCATCGTCGTGGAAATTCCACTTTCCCTACAATTAAACTCTTCCTCAGAGGAGTCAAAAATCATAAAATAT TATAAAAATTTGCGATCAATTCATTCCATTTTTCCGTTTTTCGAAGATAAATTAACATATTTAAATTATGTGTCAGATGCACGAATACCCTATCCTATCC ATCTGGAAATCTTGGTTCAAGTCTTTCGATACTGGGCTAAAGATGCCCCTTTGTTTCACTTATTAAGGTTGTTTTTTTATGAATATTGTAATTGGAATAA TCTTATTACTCCAAAAAAATCGATTTCTACTTTTTTAAAAAGTAATCTAAGAGTTTTCTTGTTCCTATATAATTTTTATGTATGTGAATACGAATCTATT TTCCTTTTTCTACGTAACAAATCCTCTCATTTACGATTAACATCTTTTAGCGTTCTTTTTGAACGAATCTATTTCTATGGAAAAATAGAACATTTTTTAG AAGTCTTTGATAAGGATTTTTCGTCTACCTTATCATTCTTCAAGGAGCTTTTCATTCATTATGTTAGATATCAAGAAAAATATATTTTGGCTTCAAAGAA TGCGTCTCTTTTGATGAATAAATGGAAAAATTATCTTATCCGTTTATGGCAATATCATTTTGATGTTTGGTCTCAACCAAGAACAATCAAAATAAACCAA TTCTCCGAGGGTTCATTTCACCTTTTGGGCTATTTTTCAAATGTGCGGTTGAATCGTTCCGCGGTACGGAGTCAAATGCTGGAAAATTCATTTCTAATCG AAATTGTTATGAAAAAGCTTGAGACAATAGTTCCAATTATTCCTCTAATTAGATCTTTGGCTAAAGCGAAATTTTGTAATGTCTTAGGGCACCCCATTAG TAAGCCGGTTTGGGCCGATTCATCCGATTTTTATATTATTGACCGATTTTTGCGGATATGTAGAAATCTTTCTCATTATTACAATGGATCCTCAAAAAAA AAGAGTTTGTATCGAGTAAAATATATACTTCGGCTTTCGTGTATTAAAACTTTGGCTCGTAAACACAAAAGTACTGTACGTGCTTTTTTGAAAAGATTAG GTTCAGAAAAATTATTGGAAGAATTCTTTACAGAGGAAGAAGAGATTCTTTCTTTGGTCTTTCAAAGGGCTTCTTCTACTTTGCAGGGGTTATATAGAGG TAGGGTTTGGTATTTGGATATTATTTTCAGCAACGATCTGGTCAATCATGAATGATTAGTTATGATACTTTGTAAATGGGTAAATCTAAACTCTCCTTAA ACGAGAATATAATAAAAAAATGCATTCATTATAGTATTCTATACCTATACTATAGGATTATGAAATGCTCATGTAGTAAGAGTGGGGATTCAGGATTCAT CAACTTAATATTTAACTTTCGTAGAGTTCTGGTCCTCTTCTGGGGAAGTAACTCAGGTTTAGATGTATACATAGGCAAAGCCGTGTGCAATGAAAAATGC AAGTACGGCTTGGGGAGGGATTTTTTCTTGTTTTACTGTTGAATCTTATTAACAAATAAATTTTCTACTCCATCCGACTAGTTCCGGGTTCGAGTCCCAG GCAACCCATAATATATCGAAGTTATATGTACATAACCATAGAGAAGTCATATTATGTATAGAAAACCGAATTTTTTGTTAGGATATAAGGTATGCCCAAG AACCAATCTGCCTAGTTTATAATAATGAAGTTATATTTATTATTATCTTA
• Tissue: pods
• Gene name: LI_gene_175503;
• Additional information: details;

Expression of Ll_transcript_496980

FPKM

• PAB: 0.8
• PNAB: 2.3
• PS1: 2.1
• PS2: 1.8
• PS3: 1.2
• PW1: 2.2
• PW2: 2
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_496980

• Blastp: Maturase K from Lupinus with 97.44% of identity
• Blastx: Maturase K from Lupinus with 97.44% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000960)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (YP_008963582.1)
• Pfam: MatK/TrnK amino terminal region (PF01824.17)
• Rfam: Intron_gpII (RF00029)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;