Ll_transcript_496991

• Id Trinity: TRINITY_DN50215_c0_g3_i5
• Name Transcript: Ll_transcript_496991
• Sequence: GGCATTCTATGTCCTTATCTGAAAACGAAGTTGTTTCTGTATCTGACTTCACAATTCATTCATTCTGCAATTACAAACATGAACAAGGGGAATCATTTTG ATGCCAAGAACCAAATCGATGAAACTGTTGAGGCTACAAATTCAGGAAGTCAACCCTGCTGCATTTTCTGCATGTCGGAAAAAAATAGCTGCCGAATTGT ACGGTCAGAAACCAAGTTAATGAATATTATGATAGACAAAGGAAAACCTGAAGAAGCTAATGTCATTTTTGAAAATCTGATTGAAGGAGGGCACCGGCCT TCTTTAGTAACATACACAACCGTGTTAAACGCCTTCACCATTCGAAAGTGCTTCAAGCCAATACAGTCCATTGTGTCACAGATGAAAGAAAAAGGAATCA AGCCTGACTCAGTATTTTTTAATGCTCTTATAAATGCATTTGCTGAATCCGGGAACATGGAGGATGCTATGAAAGCTTTCCAGAATATGAAAGAAAGTGG ACTGAGACCTAGCACCAGCACTTATAACACCTTAATAAAAGGGTATGGGATTGCAGGCAAGCCTGACGAGTCGATGAAGTTGCTAGACCTGATGTTGACC GATGGAAACGCGAAACCTAATCTCAAGACATACAATTTGCTTATCAGAGCTTGGTGTAAAGTGCAAAAGATGTTCAAGGCATGGAATATACTGTATAAGA TGTCTGCTTATGGAATGAAACCGGATGTTGTTACGTTCAACACTATAGCAACAGCTTATGCTCAGAATGGAGAGACTGTTCAGGCTGAAGCATTGATTTT AGAGATGCAGAGGAATGGTTTACAACCCAATGAGAGAACTTGCACCATCATCATGTGCGGATATTGTAGAGAAGGTAAAATGAAGGAAGCGATAAGGTTT GTACACAGGATGAAGGATCTCGGGCTGCAGCCTAATCTCGTTGATTTTAACTCATTGGTTAATGGTTTTGTGGACGTGATGGATATAGATGGCATTGGTG AGGTGAGTTTGAACCTACCATTGTTCGTCAGAACTTTTTTTCTAGTCAAACTTGATTTGCGCCTGTTCATGACAGAAAGGCCTCTTGATTATAACCGTAA AGGCTTTTCACATAGAATCAAGGATGATCCCATTTCTTTGATACTGTTGTCATTAACTAATATACAGTAAATCAAAAGGCCATGGTAAAAGACGATCGAC AACTAGCATTGGTATATTTGGATATTGTAAAATGCAATTTTGTGCGAAGGACACTTCTGGACCACTATCTTTCTAGCCATATTTCCGATGTATAAAGTAT AAACATGTTTCCGTCTTTTTGGTGCAGTTAAATTAGTTCTTGATGAGAAAGTTTTAGAATCATATTTAACTCTGTATGTCATTTTTGCTCGCAATCTGAT ATATATATGGTGAAGGGGTTGTAAGTTGTATCCTGCTAAAGGAATTTAAATTTATTGCTTTATGCATCTGGTTTCTTCATGTTCTGAGTTTAGGTTTACA TCAACTTAGTTTGAGTGCTAACTGCCTTGTAATTTGTCTAGTATATTTTTTGGCTGAAGCCTGATCGAGGAAAATATGACGTCATCGGTTCTTTAATTTG TTCGGCATAGTGGATAACAGTCTATTCGGTTTAGTTTTTGACATGTATGCGTTCCTCCTTGTAACTCATCTTGAATATCCATTATAGGTTTTAAAGTTGA TGGGAGAATTTCAGATCCAACCAGACTTGATATCATATAGCACTATAATGAATGCATGGAGCCAAGCAGGATACTTAGAAAAATGCAAGGAAGTCTTCAA CGACATGTTGAAATTTGGTGTGGAACCAGATGCGCATGTTTACGGAATTCTTGCTAAAGGTTATGTGCGAGCGCAAGAAACAGAAAAGGCTGAAGAGCTA CTAACTGCTATGGTTAAACCAGGTGTCCGACCAACCGTCGTTACATTTACAACTGTCATAAGCGGATGGTGCAGTGCTGGCAGAATGGAAGATGCTATGA GGGTTTTCGACAAGATGTGTGAATCCGGTGTTTCTCCTAATTTGAATACTTTCGAAACCTTAATCTGGGGATATGCAGAAGCAAGACAACCATCAAAAGC CGAAGGAATACTCCAAATAATGGAAGATTTTCGTGTTGCAGCCAAGAAATCTACAATGTTGCTTGTTGCAGAAGCTTGGTGTTTAGCTGGATTAGTAGAA GAAGCAAATAGGGTACTAAGGGCTGTAAAAACAAAGCAGATGTCAAATTCAATAGAAGAAGATGAAAATATAGAATCTGAAGGTTTGAAGAATATGAAAC AAAAGTCATATACCAATACTCCTTTAGGTACACTCTTACATATCCCATCTATATGTATCAATGAAGGTTCACTATTAGCATCAAGAAGAAATAGAAGGCT CTTGAGAGATTCTATTTTGGAGATTCCATTGAACTCAACAAAACTCAAGTGTCACTCTCAAATTTGTAGATTTGGTGAAGGATTTTCCATTATGTGCCAA AAACAGTTTCAATGTCAGCATGGTACATACCAACTTGCAAATTCATGTACAGCAGTGTTCTTGAACTGAGAGGGTTGGGGAGGTGAATAGCAGAATAATT GGTTGATTTAATTACATTTTCATGTAATTAAAAGTTAGTTTTATAGTTCTATCATCTGTATAACCTCGAAACAACATTTTCACTTTCGAGTAAGCCCGTG TACATCTATACTCCTCAAACCTCAGTAGGTGAGAGTCTTGCGTACTGGGCTATCCTTATATCATTTGTACAAGATGATATTTAGAATAATCCACATGTAT ATTTTTTCTTTTACTTTTGAAACACCTCTACCGGAGGAGCTTTTCATTCATTATGTTAGATATCGAGAAAAATATATTTTGGCTTTAAAGAATGGTCTCT TTTGATGAATAAATGGAAAAATTATCTTATCCGTTTATGGCAATATCATTTTGATGTTTGGTCTCAACCAAGAACAATCAAAATAAACCAATTCTCCGAG GGTTCATTTCACCTTTTGGGCTATTTTTCAAATGTGCGGTTGAATCGTTCCGCGGTACGGAGTCAAATGCTGGAAAATTCATTTCTAATCGAAATTGTTA TGAAAAAGCTTGAGACAATAGTTCCAATTATTCCTCTAATTAGATCTTTGGCTAAAGCGAAATTTTGTAATGTCTTAGGGCACCCCATTAGTAAGCCGGT TTGGGCCGATTCATCCGATTTTTATATTATTGACCGATTTTTGCGGATATGTAGAAATCTTTCTCATTATTACAATGGATCCTCAAAAAAAAAGAGTTTG TATCGAGTAAAATATATACTTCGGCTTTCGTGTATTAAAACTTTGGCTCGTAAACACAAAAGTACTGTACGTGCTTTTTTGAAAAGATTAGGTTCAGAAA AATTATTGGAAGAATTCTTTACAGAGGAAGAAGAGATTCTTTCTTTGGTCTTTCAAAGGGCTTCTTCTACTTTGCAGGGGTTATATAGAGGTAGGGTTTG GTATTTGGATATTATTTTCAGCAACGATCTGGTCAATCATGAATGATTAGTTATGATACTTTGTAAATGGGTAAATCTAAACTCTCCTTAAACGAGAATA TAATAAAAAAATGCATTCATTATAGTATTCTATACCTATACTATAGGATTATGAAATGCTCATGTAGTAAGAGTGGGGATTCAGGATTCATCAACTTAAT ATTTAACTTTCGTAGAGTTCTGGTCCTCTTCTGGGGAAGTAACTCAGGTTTAGATGTATACATAGGCAAAGCCGTGTGCAATGAAAAATGCAAGTACGGC TTGGGGAGGGATTTTTTCTTGTTTTACTGTTGAATCTTATTAACAAATAAATTTTCTACTCCATCCGACTAGTTCCGGGTTCGAGTCCCAGGCAACCCAT AATATATCGAAGTTATATGTACATAACCATAGAGAAGTCATATTATGTATAGAAAACCGAATTTTTTGTTAGGATATAAGGTATGCCCAAGAACCAATCT GCCTAGTTTATAATAATGAAGTTATATTTATTATTATCTTA
• Tissue: pods
• Gene name: LI_gene_175503;
• Additional information: details;

Expression of Ll_transcript_496991

FPKM

• PAB: 0
• PNAB: 1.2
• PS1: 0.4
• PS2: 0
• PS3: 0
• PW1: 1.6
• PW2: 1.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_496991

• Blastp: Pentatricopeptide repeat-containing protein At5g25630 from Arabidopsis with 47.59% of identity
• Blastx: Maturase K from Lupinus with 97.72% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G25630)
• CantataDB: Link to cantataDB annotations (CNT0000960)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457869.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: Intron_gpII (RF00029)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;