Ll_transcript_497427

• Id Trinity: TRINITY_DN50217_c0_g3_i4
• Name Transcript: Ll_transcript_497427
• Sequence: AAGAGTGCTGACAATATCACATGAACTTGCAGTTAATCTGAGACCCACACATCCTCACCTCTTCACATGCATGCATTTGTGTTGTGAGATACAACCTTCC TTCCACACATCTGACCCACACAAACATACATTTCTCACTTTTCACTCATCTTTGTCTTTCTCTCTAACCAAATAATATAACTTTATTAAAAATGGATTAG GGAAAACATAATTTTTATGCCAGCTCTGACCAGATTGGTTGCACATTTTTAATATCATTAAATAAAACAAATAACTTCATTTGTCTTCCTAGCTGTCTAT CTCTCTCTCTCTCTAAACAGAACACATTAATACAATTCCTCTTGGATCTGATGAAATCATTAAAACTCTGCATTGGTACTAGTTTTACATTTAGGTGGTT GTTCAAGTTGCTTTGTATGTGTGTGTTTATGTTCCTTTCTCTCTCTGTGTATGTGTGTTTATTCTGAGGGTATTGGTTCTCTTACTTTCATTTAGCCTTT TGTTTTGTTCATATCATAGAAAGTAATGTCTGCTTTGTTTTGTGAAATTCAATACCCAAAAAAGGGAACTTCAATTGTGGCCTAGACCAAGTTTTTGAAG ATAAAGGGTGTTCATTTTTCATCTTTAATCATAAAAAGATTATATTTTTGGATTATAAGGAGTAGGGACCAAGGACCATTGTGTGATTGTTGTGAGTTCT CTGGAATAATGGATTCCACAGTGTATTAGTTGAATCAGAATCATTTTCCTGAAAGTGGTTTTCAATTTGCAGTTGTGTTTTATGAGTAGATTTGACTTTA GAGGGTAATAAATGATAGATCTTTTATGAAGAGGGAGTAATTGGAATTGGTTGTGGTAGTTGAGGAAGAGGTTGAGTTTAATTGGAAGAATAGAAAGAAT AGAAGAGGAGTGGATATGGCTGCAAAGCTTCTTCATTCTTTAGCAGATGAAAATCCAGATTTGCAGAAGCAGATTGGATGCATGACTGGGATTTTTCAAC TCTTCGATCGTCACCATATTGTTACTCCTCACACCATTACCCACAAGAGGCTTCTACCAAGTAATTCTCACTTCAATCATGACAACCTGGAAAGAGATTC TAACGGCATACGTCATCAGCAAACAGGACCAGATATAAGCTTAAACAAGGATGTGAGTGAAAAACAAAGAGTTTCAACAGAATCATCAAGAGTTTCATTC TCTTCTTCTGCTTCATCATCAATGTCCTCTCTGGACTTTAAAGCCTTTGACCAGATTAACTTTCCTGAAACCGAAATGAGGGACAGAGTGATGAACCAAA GAAGTACCTCTCCTCATTTAGGACGCCAGTCCCTTGATCTGAGGGATGTGGTGAAGGACTCTATGTACAGGGAGGCAAGAGGACTATCAGTGAAGACTAC AGCCAAAGACGAAGCTGTGATTCGTGTCATGAAGCATAGAGATTCTCCAAGACCTCTTCAGCTGTCGAAATCTGATGGACGTGATAGAGTTGCAATAGAT GGAAAACAAAGTGTGCCTATTGATATAAACGACCCTCTCAGAGTCCTTTCTAAACTTAGAGAAGCACCTTGGTATTATGGTGAAGCAAGAGAACCTTCAA GACTATCATCCGATGAAGTAAAAGATGGAGTACACTGGCATTCTATCTCGAAGGATGCGCCTCGGTATTCTTATGATGGAAGAGAAATAAGTCGCATGTC TTTTGACTCAAGAGAAACCATCAAATGCCAACCAAAGCTGCATGAGCTTCCTAGACTTTCATTGGACAGTAGGCAAGGTTCTAGTAGCACATACAATTCC AAAAAACACAGCCACCTCTCAAGAAATTTCAGTACTGGTAACTCCACCTCAGATGACAAAGTCTCTAATTTACAACAGTCTTGTGTAACTCAGCGCCGGC CACCAAGTGTTGTAGCAAAATTGATGGGCTTGGAAGCATTGCCTGAGTCCTATTTGGCCAATGATACTCAATCAAGTTTGAGCGAAACTGGCTCAACTGA AGGTAATGGTCAGTTTTCGAGATCATCAAAAGATGGACTCATTAGGCCACTTCAAATTTCTAATTCCCCGAAAATCTCATTGAAAGACCTGAATTATCCA CAGCGAAAGAATCCTGATTCGGTTGTGAAACCCATCTCAAGTTCAAGGTTTCCCATTGAGCCCGCACCGTGGAAGCAGCAAAATGGAAGCCGAAGCTCCA AGAAACCGAGTCCCAAGGTCTTAAAAGCTCTACCAAAAACACCAGATTCATTTCCTTCAGTTTATAGTGAGATTGAGAAGAGATTGAAGGATCTAGAATT TAAACAATCTGGACGGGATCTCAGAGCTCTCAAACAGATACTGGAAGCAATGCAAGTAAAGGGTCTGTTAGAGACCAGAAAAGAAGAACAAGCTTCAAAT ATTGTTGGAAGTCACAGAGACTATGAACCAAGACATTTGAGTTTAATTCAGAATTCTAGGCCAGTAAGGCAACAAAATTCTCAAGGAAACAATCTTGCGT TTTCCACAAATAGAGGATCTAACACAGCGCGAACTTTCGAATCTCCAATTGTGATAATGAAGCCAGCAAAGTTTGTTCAGAAAGCTGGAACTCCGGCTTC CTCAGCCATTCCAAGTGTTGGTCTTTCTCATCATACACTCCAGAGTGGTAGTGGTGTACATACAGATATTAAAAAAGGTACATCTTGTGGTCGGATAGCG AAAGATCAATCTCCTAAAAACACTCGCAGGGATGCTTCTACCAGTTCCAGTGATAAGAAAACAAGTAGTAGCAGGAATACAAAATCAACACAATCACAAC CAAGGTCTCAACAACTTCCAAGTTCAGTAAAGAACTCAGGATCAGTGAGCCCTAGAATGCAACAGAAGAAGTTAGAGTTGGAGAAGCGGTCACGTCCACC TACCCCACCATCAGATTCAAATAAACCAAGAAGGCGATATGGTAAGCAGGCAACGGAATCAGTCTCACCAGGTCGGAAACTGAGACATAAAGTCCCGAAT CCACATCACAGCGATGACCAACTGAGTGAGATAAGCAATGAATCAACAAGTTTAAGTTGCCAAGGGGATGAAATATCTCAGCAATCAGACGATTCTAAGA TGGATATGGAAGTCACCAGTCATTTACCATCTGATCAAATTATTGATAGACATACCACATCTTTGAAGGCGATTGAGCAGTTGGTTTCAGGATCAATGCA TAAGAATTCAACTCTGAGGTTGGATGAGGATGAGTCAACTGCAGGACTTGCAACAGATGGTCCAGATCATCCAAGCCCGGTTTCAGTTCTGGATGGCTCA GAATACACAGATGATGCTCCCAAAGGTATTGTTTTGTCTTCCAAATAAGGGTACATGATGAACAGCCATATTATCTCCCATGACTGTAATTCATGCCGGG TCTAATAAAATAAGACGAATTCTTTGTTTTGACAATCAAATCGGTATCAAGCTTGATTACAATTTTATGCATTGAAGAACATTTAGTCCTTTTCTTTTTG AAATGGTTCCTCAAGCATGTAGGTGGAAATTTGAAACCCCTTTTTTAAGAGGGACTCAAAACAATTTGAGAATATCAGTTTATCATGCTCATACTTAAAA GTGTCTTAATTTGGCACTTAGATATGATGCTGCCTAATTATCTTCCCATTTGGGTGATGAAATTTCTGGTTTGTAAGCTGTGATTTGTGGCCGACCTTAA GTGATGTTCAGCAGTGTGCATTTCAAGAATTATCAAAGGCAATGATAGCTAGGAAAGTACTCTTGCTTAATGCATAAGACATCATAATTGAAATTGTGGT TAATATCACATTGAAGCCCCCAAGGCTTTGTACATTCTTCCTTGCCTAATCTATTATTTTTTCCTGAAAATGTAGCCTCAGGCATATATAGTCAATGTAC TATGAGTCTCGTTTTTTAATCGCATCTCATTATACACTTATTTGCAGCAGCC
• Tissue: pods
• Gene name: LI_gene_175519;
• Additional information: details;

Expression of Ll_transcript_497427

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.3
• PS3: 0.3
• PW1: 0.2
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497427

• Blastp: Protein LONGIFOLIA 2 from Arabidopsis with 30.77% of identity
• Blastx: Protein LONGIFOLIA 2 from Arabidopsis with 29.22% of identity
• Eggnog: NA(ENOG411078I)
• Kegg: Link to kegg annotations (AT3G02170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463102.1)
• Pfam: DUF761-associated sequence motif (PF14383.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;