Ll_transcript_497328

• Id Trinity: TRINITY_DN50219_c0_g1_i7
• Name Transcript: Ll_transcript_497328
• Sequence: AATACCGAACCCACTACACATTAATAATTCATTCCTATCTGCGGTTTCACGACCCCAAGATACAGAGAGAGCAACGAGCCTCTTCTCCCGTTGGTTGCAA AACCCGGCAAACCAGGCCGACAGATTCACATATAATATCCGTAACCGAGTCAAATTCACTGTTCGGGAGAAGATCCATCTTCTCTCTCTTTGCATTTCAC AACAATTCTAATTCAGATCACATCACCGTAGCGTAACCTTCAAATCTCAGCAAAGGCTAAAAATGAAATAAACTTTATTAACAGATCTCTCTTTTTCCCT CACTTTTTACTATACGCTATTTCCCTCGCAATTCTAACAAAAAATACGATGAATCGAAGAATCGTTCTCGCTATTTACTTCTTCATCTTCTTCAACCTCG TGCTGATAACGTTTTCTCAGGATTCTCTGGTGAAGGAAGATTCTGGTGGATCTGTGGATCTAGGTCGTCGTGGCAAAATTGTGAATAACCAAGAGGATGA TGGGTGGAACAGTGGTGGGGTTGATCTTGGCTTGGAGGCTGGCCTTGGAGTCTTTGATGCTTTTTTTGCCAGTCTATCCATGATCCTTGTCAGTGAGATT GGGGATGAGACATTTATAATCGCAGCTCTTATGGCCATGCGTCACCCTAAGTCAATTGTCTTGTCCGGTGCACTGTCTGCCCTCGTTATAATGACAGTGC TTTCTACCGGATTAGGCAGGATTGTGCCAAATTTGATTTCGAGGAAGCATACAAATAGTGCTGCTACAGGTAAAATTTCTGGGTTTGATGCTTACCTTTG ATCAGATTTCTATATTATAATTTCTGAAAAATCCGTAAAAAGAGGGGGTAATAAATATTGTCTGCATTCTGCCTCTGTTATAGAAGCTTCTATAATTAGT ATCATTGACATGATTTTGGGATGCGACATTTGTGCGTGGTAGATGCTTTTCAATTCCATGTTCTATTCTATGATCCAATATTAGTTGGTTATGTCTGTTT ATTCCCGTATGGTGATTATTATTTTGATTAAAAAATTATTTCTTCATTTTCCTTAGTCAGGGTTCTATTTGTGCCGAGCCTTCAGGCAAAATCTGGCTCT TTATTATATCAAGGATACAGAGTTATTATAGATTTGGCTTCTTTTTCTGTCAACTTTAGTTATGTTCCCATAAATTGTTTGTATTTTTGCTTCTATAAAG TCCATGAGGATTCTTGTCATCAATATTAAGGCTGCAGGTATGAACTTTATTAATATGTGCATTCATGTGAATATTTCGTATGTACTACTCAACCAATTTT GTGCCATTTATTTGATTTCCGTTTATGCCCTAATCATTTACACTTCTCCAAATTTCCATTCATTTTCTTGTGTTAAGGCTGGGTTTTACTTTTCTGTACA AGTTAATTTTTGTTAAAGATAATATGACGCTAAGCCTGTCCTTATTTTGAATTATGCAGTTCTTTATGCTTTCTTTGGGTTACGACTGCTATACATTGCT TGGAGATCATCAGATTCAAAATCTTCACAAAAGAAAGAAATGGAAGAAGTATGTTTCTATTGACTCTTCACAAAGTTAAATTCTTGCACACTTATTTGCC TTTATCATTTATAATACCGGGGTGGAGATGTATTGCTTCAGGCGCCTATGTTCTGAATGACGCATTTTTAAAGGGTGAACTTGGCGCAACATTAAGGTTA TTGCATAGTGATAATGAAGTTACGGGTTCAAATTGTTGAAACAGTCTCTCCACTTGCAAGAACAAGGCTGCGTACATCTACCCTCTCTGGACCATACTTA AGCGGGAGCCGCGTGTATTGTGTGCCCTAATGATTGTTGTATATGGCCAGTTCTGTGTGTGTTTGTCTGGAGTTCAATGTATAGTTGTATATTGATGTTG GCCTTTTGGTTATGAATGTTACAATATGCTAACAGCTACAATCTTGACATAGATTCAAGTTTCAATTCTACTTTTTTCTTTTTTTAATTATAGAATCCCT GATTCTCGACATGGTCGATTTGCCATGAGAAGAGGTGAGTATTAATTACATGTGAACATATTATCAGAGTTCGGGGGTCCTAAAATCGTTGAATTGTTTG GCTCAATGTTTTTTCTTTGAAAAGGTTAAATACTGTTCTTGCTAAAAATTTGCTCTTTCTGTTAACTAGGTAGAAGAGAAACTTGAAGGTGGGCAAGGGA AAACTGCAGTTCGACGTTTCTTTTCAAGATTTTGCACACCAATATTTTTGGAGTCTTTTATTTTAACGTTCCTTGCTGAGTGGGGTGACCGAAGCCAGAT CGCGACAATTGCTCTTGCAACACATAAAAATGCAGTGGGAGTAGCAGTTGGTGCCACTATAGGACACACCATCTGCACTTCAGTAGCAGTGATAGGAGGA AGCATGCTGGCATCTAAGATCTCCCAACGGACAGTAGCCACTGTTGGTGGCTTGCTCTTCCTCGGCTTTTCGTTGTCTTCGTACTTCTACCCTCCTGTAT GATTAATAATCGCAGATTAATCTGATTCTTATTTGTTTGTAGTCTTTCCACCTTGATTTTTTCACTTAAAGTTGTATTAAAGAATTTGTACTTACCTGCA TAGAAAGCTCGATCCTAGCTGAAACTGAAACTTCAGATTTTGAATGTCATTCGATTTTTTTTGTAATTGCATTCGCACCTCTATCCATTTACACTTAAAC AAATGGTATTTATCATTATTAC
• Tissue: pods
• Gene name: LI_gene_175531;
• Additional information: details;

Expression of Ll_transcript_497328

FPKM

• PAB: 1.2
• PNAB: 2.6
• PS1: 1.1
• PS2: 2
• PS3: 1.5
• PW1: 1.3
• PW2: 2.7
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497328

• Blastp: GDT1-like protein 3 from Oryza sativa with 70.4% of identity
• Blastx: GDT1-like protein 3 from Arabidopsis with 88.35% of identity
• Eggnog: transmembrane protein 165(COG2119)
• Kegg: Link to kegg annotations (4350494)
• CantataDB: Link to cantataDB annotations (CNT0002327)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431928.1)
• Pfam: Uncharacterized protein family UPF0016 (PF01169.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;