Id Trinity | TRINITY_DN50224_c1_g1_i12 |
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Name Transcript | Ll_transcript_498464 |
Sequence | GTTCCAATTTATGTACTCCTTTGACTTCTTTCTCAATTTCGATAGTATTTATGTGTTTTTTCTCCCTTTTTTAGGTGGATATTACTATGGAAAAATAAAG TTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACTCAGAAAAAGATTTGTTTGTCAATGAGTGATT TTCATCCAGAAAGTTGGAATCCTATGTGGTCTGTATCAAGGTCAGATTTATCCTAGGCTCCTAGCTATAGTTTGGCTTATTTTTTGTTTACTCTTTGACT TTTAAAATGTGATTATTTGAATTTTATTGAGCCTTGTAAGAGTAGATGCAGTTTTTTACTGATACCTGAGAGAAACAGTAGATGCAGATTTTTACTTTAT AGCTTTATACTGATGTTTCCAATTTATGACTGCAGCATACTTACAGGTCTTCTTTCTTTCATGGTGAGTATGTCATGGCTACTTCAATTTTAACTGAATT CTAATTTCTTCCATCTCCTATAGCTTGTTCTTGGTTAGAAGATGCTACTCTTGTCTTACCTTTTCTTTTTAGAGTAGGTGGGAGGGGAATTAAACCCGTG TCCCTCACTTTTTGTGTGGACTCAGTTTTCAGTTTTGTCAAATAGCGGCCATGGCTGATTGTGGTGGCATTTTTCATTATAACGCCACACATGGTGTAAA ATACGGGAGCTAAATGGAGGCATCTGCCATTTGGGAGCCAAGGCGGTATGGGGTGGCAGGTTTTCGGATTTTTGAACTATAATTTTCGGTGTTAACCAAA AAATCAAAGGCTAATCTTGGATTTTACCTTAAAAGTTAAAAAACCTTAAATTTAAAAAAAAGGACTCATTCTCACATTCGAAGCTTCCCCTCTTGCTTTG CGCTCTCTCTCTTACTCACTGTCTCCTGTGCGACCAACAACTCATATTCTTATCCTTTCTTCACTCTCCGAGGTAGGCCAACACCAGCACTGAGAGACGA AAACTAGGGGAGTGAATGGGATTAGATAGATACCCCAGTAGTCCTAGGCTCCTAGCCGTAAATGATGGATACTAGGCATTGTGCATATTGACCCATAAAA CCTCAACAACTTCTTTACCTTTTGTTTTTTTGTTGTCTGATCTTATAGGACTTGTTAGTATTAGTCATTTTAATTTTATAGTGACATTATAAGCCTTTAT GAATTTTATTGAACCTTATGTCATGTTATTGGTTGCCTTAACGTTTTGTTATGTAGTTTATGCTATTATTTCTTTTTTTGAACTTTTCTATATAAATTAT ATTCTTAATTTTTTTGCCAACTGCCATTTGCCTGCAACGCTATCCGCTATCTGTATGGCTGAATTTTGGCGAACGCCGTGGGCTGCCATATGCCATCAGC AACACTGCCACAGATCCAAAGCTCAAACTGTCGATATTACTCGTCTTTATTGTATACATTATGTCAAAATGAAAACCGATGCAGTTTTCTAACTTTGTGT TGGTAGACTCCCAAGTCCGAACGACCGAAATGTGTTTATAGTACTTGTTAACAGAGTCAGTTTAATTCCATGGGTGATTTTAGTTGTATGTAGTTCATAG TGTATGTGCAATGTTTTCTTGAGAGCATTTGATATCTGACAGACTTCTCCTTTGCAGATGGACAACAGTCCAACCACCGGCAGTGTAAACACAACTACCG CCGAGAAGCAGCGGCTAGCAAAATCTTCCCTTTCTTTCAACTGTAAGAATGCAACATTCAGGAAAATGTTCCCTGAGTATGTGGAGAAGTACAACCAGCA GCAGCTTTCTGAGCAAGTTGCTTCCGAAAAGGTATTGTCGGAAGCTTCTCGTGATAAAAGTTCAAGTCCTGTTGTAGAAAAGAATTTGAATTCTACAAGG GAAGACATGAAAAAAGTAGATGGTTTGAAAGAGGTGAGAAAAAAGAAGCAACCATTTCCAACATGGATGATGCTATTACTCTTCTCAATCTTTGGGGTTG TAATGGCATTACCACTACTTCAGCTTTGATGATAGCCACTGAAATCTTATTTGGTTCCATATATGGTTTTCCTGGAACTGGTTTTATATAATTCTGCTTA GGTTTTTGTCATGTCTAACAGGGATTTGTATAGAGAAAATGGACATGGAGGCTACTTTATATCATGTCTGAATTTTACTCCTTTGTGTCTATGTTATCAA CTTTTTGTAGTCAATGATAAGAAGTTACATGCTTCATAGTTGTGGTGTTCCTGTATCTGTTTGAATTAAGGTTTGTGTTGTAGTATTGTTTGGTAAACAC ATTTAGCTATGGTTTTCGTTCTACATTTTAGAAGCATAGGTAAATGGAATTAGATAATCATATATTATAGGTAAAAATTCATTGTATGCAAAATAACAAA AATATCATTCATCTGCATGTTAATCCTTTTGTGCGTCATGGATGTTTGTGACTCATCAG BLAST |
Tissue | pods |
Gene name | LI_gene_175577; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498464
Blastp | Ubiquitin-conjugating enzyme E2 34 from Arabidopsis with 59.68% of identity |
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Blastx | Ubiquitin-conjugating enzyme E2 34 from Arabidopsis with 59.68% of identity |
Eggnog | Ubiquitin-conjugating enzyme E2(ENOG410Z0AN) |
Kegg | Link to kegg annotations (AT1G17280) |
CantataDB | Link to cantataDB annotations (CNT0000963) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430306.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |