Ll_transcript_498466

• Id Trinity: TRINITY_DN50224_c1_g1_i14
• Name Transcript: Ll_transcript_498466
• Sequence: CAGAGAGGCACAACTCTCTCTTCTCTACCGAGATTCAACGCCGTCGTTTTAGAACTCTTCGCTTCTCTCTTTGAAGGAAGAAAATAATTAAAGCAGAAAT ATTATATTTTGAATTTGTTATATTCCAATTGGAACAAAAGGAATCGGATCTCAGTGCTTTGCAGGACAAAGAATAAAATTACAGTTTAGGGCATTGCTCT TCGTATTGTCTAGGATTTGGTGGATGGCAGAAAAATCATGCATCAAGCGCCTTCAGAAGGAATATAGAGCTCTTTGTAAAGATCCAGTTTCCCATGTTGT TGCCCGTCCTTCACCAAATGATATTCTTGAGTGGCATTATGTGTTGGAGGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTACTATGGAAAAATAAAG TTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACTCAGAAAAAGATTTGTTTGTCAATGAGTGATT TTCATCCAGAAAGTTGGAATCCTATGTGGTCTGTATCAAGGTCAGATTTATCCTAGGCTCCTAGCTATAGTTTGGCTTATTTTTTGTTTACTCTTTGACT TTTAAAATGTGATTATTTGAATTTTATTGAGCCTTGTAAGAGTAGATGCAGTTTTTTACTGATACCTGAGAGAAACAGTAGATGCAGATTTTTACTTTAT AGCTTTATACTGATGTTTCCAATTTATGACTGCAGCATACTTACAGGTCTTCTTTCTTTCATGGTGAGTATGTCATGGCTACTTCAATTTTAACTGAATT CTAATTTCTTCCATCTCCTATAGCTTGTTCTTGGTTAGAAGATGCTACTCTTGTCTTACCTTTTCTTTTTAGAGTAGGTGGGAGGGGAATTAAACCCGTG TCCCTCACTTTTTGTGTGGACTCAGTTTTCAGTTTTGTCAAATAGCGGCCATGGCTGATTGTGGTGGCATTTTTCATTATAACGCCACACATGGTGTAAA ATACGGGAGCTAAATGGAGGCATCTGCCATTTGGGAGCCAAGGCGGTATGGGGTGGCAGGTTTTCGGATTTTTGAACTATAATTTTCGGTGTTAACCAAA AAATCAAAGGCTAATCTTGGATTTTACCTTAAAAGTTAAAAAACCTTAAATTTAAAAAAAAGGACTCATTCTCACATTCGAAGCTTCCCCTCTTGCTTTG CGCTCTCTCTCTTACTCACTGTCTCCTGTGCGACCAACAACTCATATTCTTATCCTTTCTTCACTCTCCGAGGTAGGCCAACACCAGCACTGAGAGACGA AAACTAGGGGAGTGAATGGGATTAGATAGATACCCCAGTAGTCCTAGGCTCCTAGCCGTAAATGATGGATACTAGGCATTGTGCATATTGACCCATAAAA CCTCAACAACTTCTTTACCTTTTGTTTTTTTGTTGTCTGATCTTATAGGACTTGTTAGTATTAGTCATTTTAATTTTATAGTGACATTATAAGCCTTTAT GAATTTTATTGAACCTTATGTCATGTTATTGGTTGCCTTAACGTTTTGTTATGTAGTTTATGCTATTATTTCTTTTTTTGAACTTTTCTATATAAATTAT ATTCTTAATTTTTTTGCCAACTGCCATTTGCCTGCAACGCTATCCGCTATCTGTATGGCTGAATTTTGGCGAACGCCGTGGGCTGCCATATGCCATCAGC AACACTGCCACAGATCCAAAGCTCAAACTGTCGATATTACTCGTCTTTATTGTATACATTATGTCAAAATGAAAACCGATGCAGTTTTCTAACTTTGTGT TGGTAGACTCCCAAGTCCGAACGACCGAAATGTGTTTATAGTACTTGTTAACAGAGTCAGTTTAATTCCATGGGTGATTTTAGTTGTATGTAGTTCATAG TGTATGTGCAATGTTTTCTTGAGAGCATTTGATATCTGACAGACTTCTCCTTTGCAGATGGACAACAGTCCAACCACCGGCAGTGTAAACACAACTACCG CCGAGAAGCAGCGGCTAGCAAAATCTTCCCTTTCTTTCAACTGTAAGAATGCAACATTCAGGAAAATGTTCCCTGAGTATGTGGAGAAGTACAACCAGCA GCAGCTTTCTGAGCAAGTTGCTTCCGAAAAGGTATTGTCGGAAGCTTCTCGTGATAAAAGTTCAAGTCCTGTTGTAGAAAAGAATTTGAATTCTACAAGG GAAGACATGAAAAAAGTAGATGGTTTGAAAGAGGTGAGAAAAAAGAAGCAACCATTTCCAACATGGATGATGCTATTACTCTTCTCAATCTTTGGGGTTG TAATGGCATTACCACTACTTCAGCTTTGATGATAGCCACTGAAATCTTATTTGGTTCCATATATGGTTTTCCTGGAACTGGTTTTATATAATTCTGCTTA GGTTTTTGTCATGTCTAACAGGGATTTGTATAGAGAAAATGGACATGGAGGCTACTTTATATCATGTCTGAATTTTACTCCTTTGTGTCTATGTTATCAA CTTTTTGTAGTCAATGATAAGAAGTTACATGCTTCATAGTTGTGGTGTTCCTGTATCTGTTTGAATTAAGGTTTGTGTTGTAGTATTGTTTGGTAAACAC ATTTAGCTATGGTTTTCGTTCTACATTTTAGAAGCATAGGTAAATGGAATTAGATAATCATATATTATAGGTAAAAATTCATTGTATGCAAAATAACAAA AATATCATTCATCTGCATGTTAATCCTTTTGTGCGTCATGGATGTTTGTGACTCATCAG
• Tissue: pods
• Gene name: LI_gene_175577;
• Additional information: details;

Expression of Ll_transcript_498466

FPKM

• PAB: 6.6
• PNAB: 3.5
• PS1: 4.8
• PS2: 5.9
• PS3: 7.5
• PW1: 4
• PW2: 5.4
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498466

• Blastp: Ubiquitin-conjugating enzyme E2 34 from Arabidopsis with 59.68% of identity
• Blastx: Ubiquitin-conjugating enzyme E2 34 from Arabidopsis with 96.19% of identity
• Eggnog: Ubiquitin-conjugating enzyme E2(ENOG410Z0AN)
• Kegg: Link to kegg annotations (AT1G17280)
• CantataDB: Link to cantataDB annotations (CNT0000963)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430306.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;