| Id Trinity | TRINITY_DN50227_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_498034 |
| Sequence | ATGAGATTTAGGACGCCAATCCAAACATAGCCTTAAAACCCTCCCTCTTCGGCGTCACACACTCCACGAGAGGATTTTTTTCTTACCCAAAAGCGCTTTC TATGGCGCACTCTGCTTCCACTTCTACTTCGATTCTTCTTCTTCTACTACTATAAAACGCATGAAAGAAATGGCTTATTGTTTTAAGTATCATCACCATT TTCTTCACCACTTTCACTCCGTTCTGAAAACGCTTCCATCACCACGACGTCGTTTTCGTAGAATTCACTTTTCCAATCTTCACACGCCGAACCTGAATCT TCGTTCTTCACACGCGGGTTATTGTAGTAGCGCGTCTAGTATACTGACTTCAGATTCGCGTGAAATTGTTGCTGCCCCAAACACTGATCCTGCAAATGGC AGAGTCATGCTCATTGATGGCACCTCCGTTATTCATAGGTCTTATTACAAGCTTTTAGCCAAGTTGCACCATGGCCATCTAGCAAATGCAGATGGGAACG GAGATTGGGTTTTAACAATATTTACAGCTCTATCACTTATAATTGATGTTCTGGAACTTATCCCTTCCCATGTGGTGGTGGTGTTTGACCATGATGGAGT TCCTTTTGGTCCTACTTATAATTCATCAAAAGGAAGTTTTACTGCAAAAGGCCAAAATTTTCGCCACAATCTATACCCCTCATACAAGAGCAATCGTCCT CCAACTCCTGATACTATTGTTCAGGGGCTTCAATATCTCAAAGCATCCATCAAGGCTATGTCCATAAAAGTCATTGAGGTTCCAGGTGTAGAAGCAGATG ATGTGATTGGAACATTAGCCATAAGGAGTGTTGATGCTGGGTACAAGGTCCGAGTTGTCTCCCCAGACAAAGATTTTTTTCAGATTCTATCTCCTTCATT ACGTCTCCTTCGAATTGCTCCACGTGGTGATCAGATGGTTTCATTTGGAGTTGAAGATTTTGAAAAGCGATTTGGAGGTCTGAAACCATCTCAGTTTGTT GATATGATTGCACTTACTGGTGATAGAGCTGATAATATTCCAGGTTATTTTGTTCTCCTCTATGTCGACACTGAAACATCATTTGCTGAAATATGACTAA GGAGTTAGAACTTAGAACATGGTTACAGAGAGTCTATGTAGATTTCAAAATTGGGAATAAATTTATTTGTCATCTTTGAAATCAATGGGTATTAAGACCT ATGGGCTGTGAAAATATTGGGATTATTATTGTATTGTGAGAATGTGAGTCTTATGTTAGGAGTGTTAGGTCAAAATCAATTTTTTCTAACCATTGCCCTT ACGGTAATGTTTAAGCAACCTAACAAAGTTAAGTCAGCATGGAAAAACTAAAATTGTTTTATCTTAATTAAATACTCCAATTCCCATTGAATTTCCTTAT GTGGGTTGCTTAAACATTGCACTAAGGGCAACAATGGTTAGCAACATAGAAAAACTGTTTTTTATTTATAAAAAAATGTACCATAGTTGTACATGCCTAG ATTATTAGCATAAGAAGTAGTATTAGAAGTATAACATTATAGACAAAAAATCAGGAAAATCACTTACCAAACATGTTAACTTGCCAAGTTAAATATCAAT CAAGGTCTGGATCATAATCATTTCCCGTCTTTTTACATGCCTAACTAATGGATCGTCACCCTCATAGAATAGAGATAAGAATGGAATCACCTATCTGTAC CAAGCATGCTCTTAGGGGATAATAAGTTATATATGCCTCTGGAATTTTAAGAAATATTTAATACTTTTAGTTCTTTATAACTGCAGGAGTTCATGGAATT GGAGATGTACATGCGGTGCAGTTGATCAGTAAATTTGGAACATTAGAGAGGTTATTGGATTCTGTTGATCAAGTTGCAGAGGATCGTATTAAAAAGGCGT TGATTGCAAATGCCGAGCAGGCTCTCCTTAGCAAAGAACTGGCGTTGTTGCGCTGTGATCTTCCATTCTACATGGTACCATTCACTACAAAAGACATCAC ATTTAATAAACCAGAGGATGATGGGAGCAAATTCAATAGCCTTTTAAATGCTATCGGCGATTATGCGGAAGGGTTTTCAGCCGATCCTACCATCAGGAGA GCATTTCATTTGTGGAAGAAGTTGGATTCGAGATGAAGACCATTAAGTCACCACATCAGATTTTGTTCTAGAGAGAGGATTTTTTGAAGAGCATGCTGAT ACTGGAACACCATGAGGAGATTTAAGTGTATAGTAGAGAGTGAGTGAGTTTTTCTCAAGTGGAGATCAGAGCACTACACTGCAATGAATACAACATATTT GGTTATGTTGACCAAGATTACTTCATTTGTTGTTAGTTTTAGTTAATTCACCTCATCAAGAAACTGTACATTTTTTAGGTGAAAAGCATGCACAGTCAAA ATAGGTGATAAGTAATTCAAAAGGGAGCATAAATTTCTCATTTTTAGAAAATACTTTTTGCTATTTAATTGTCGATTTCAAAGATTAAAATAATAATATT TTTTTATTATCTATTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175620; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498034
| Blastp | DNA polymerase I, thermostable from Thermus with 33.49% of identity |
|---|---|
| Blastx | DNA polymerase I, thermostable from Thermus with 33.49% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424416.1) |
| Pfam | 5'-3' exonuclease, N-terminal resolvase-like domain (PF02739.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |