Id Trinity | TRINITY_DN50227_c1_g1_i3 |
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Name Transcript | Ll_transcript_498036 |
Sequence | ATGAGATTTAGGACGCCAATCCAAACATAGCCTTAAAACCCTCCCTCTTCGGCGTCACACACTCCACGAGAGGATTTTTTTCTTACCCAAAAGCGCTTTC TATGGCGCACTCTGCTTCCACTTCTACTTCGATTCTTCTTCTTCTACTACTATAAAACGCATGAAAGAAATGGCTTATTGTTTTAAGTATCATCACCATT TTCTTCACCACTTTCACTCCGTTCTGAAAACGCTTCCATCACCACGACGTCGTTTTCGTAGAATTCACTTTTCCAATCTTCACACGCCGAACCTGAATCT TCGTTCTTCACACGCGGGTTATTGTAGTAGCGCGTCTAGTATACTGACTTCAGATTCGCGTGAAATTGTTGCTGCCCCAAACACTGATCCTGCAAATGGC AGAGTCATGCTCATTGATGGCACCTCCGTTATTCATAGGTCTTATTACAAGCTTTTAGCCAAGTTGCACCATGGCCATCTAGCAAATGCAGATGGGAACG GAGATTGGGTTTTAACAATATTTACAGCTCTATCACTTATAATTGATGTTCTGGAACTTATCCCTTCCCATGTGGTGGTGGTGTTTGACCATGATGGAGT TCCTTTTGGTCCTACTTATAATTCATCAAAAGGAAGTTTTACTGCAAAAGGCCAAAATTTTCGCCACAATCTATACCCCTCATACAAGAGCAATCGTCCT CCAACTCCTGATACTATTGTTCAGGGGCTTCAATATCTCAAAGCATCCATCAAGGCTATGTCCATAAAAGTCATTGAGGTTCCAGGTGTAGAAGCAGATG ATGTGATTGGAACATTAGCCATAAGGAGTGTTGATGCTGGGTACAAGGTCCGAGTTGTCTCCCCAGACAAAGATTTTTTTCAGATTCTATCTCCTTCATT ACGTCTCCTTCGAATTGCTCCACGTGGTGATCAGATGGTTTCATTTGGAGTTGAAGATTTTGAAAAGCGATTTGGAGGTCTGAAACCATCTCAGTTTGTT GATATGATTGCACTTACTGGTGATAGAGCTGATAATATTCCAGGAGTTCATGGAATTGGAGATGTACATGCGGTGCAGTTGATCAGTAAATTTGGAACAT TAGAGAGGTTATTGGATTCTGTTGATCAAGTTGCAGAGGATCGTATTAAAAAGGCGTTGATTGCAAATGCCGAGCAGGCTCTCCTTAGCAAAGAACTGGC GTTGTTGCGCTGTGATCTTCCATTCTACATGGTACCATTCACTACAAAAGACATCACATTTAATAAACCAGAGGATGATGGGAGCAAATTCAATAGCCTT TTAAATGCTATCGGCGATTATGCGGAAGGGTTTTCAGCCGATCCTACCATCAGGAGAGCATTTCATTTGTGGAAGAAGTTGGATTCGAGATGAAGACCAT TAAGTCACCACATCAGATTTTGTTCTAGAGAGAGGATTTTTTGAAGAGCATGCTGATACTGGAACACCATGAGGAGATTTAAGTGTATAGTAGAGAGTGA GTGAGTTTTTCTCAAGTGGAGATCAGAGCACTACACTGCAATGAATACAACATATTTGGTTATGTTGACCAAGATTACTTCATTTGTTGTTAGTTTTAGT TAATTCACCTCATCAAGAAACTGTACATTTTTTAGGTGAAAAGCATGCACAGTCAAAATAGGTGATAAGTAATTCAAAAGGGAGCATAAATTTCTCATTT TTAGAAAATACTTTTTGCTATTTAATTGTCGATTTCAAAGATTAAAATAATAATATTTTTTTATTATCTATTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_175620; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498036
Blastp | DNA polymerase I, thermostable from Thermus with 33.33% of identity |
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Blastx | DNA polymerase I, thermostable from Thermus with 33.33% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424416.1) |
Pfam | 5'-3' exonuclease, N-terminal resolvase-like domain (PF02739.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |