Ll_transcript_499198

• Id Trinity: TRINITY_DN50241_c5_g1_i12
• Name Transcript: Ll_transcript_499198
• Sequence: GGAGTAGATTTATTTTCAAGCCATATATAATTAATAATTATAATGTTGTTTGATTTTATTTAAGGAACCCTTTGTCCCTTCCAAAGATACCTAGAGAAGG AAACATACACATTAACGAAGTCCCAACCAAGTCTCAAACTACGCTCTTCATCCTTTCTCACCTAACACCTCATTTTCGATTCGTAATCACGAGCATGTGT TTGGAGGCATCTAATGTCTTCATTTCGTTAATCACCTCCTTACTTGCAGATATTGGCACAAATTTGGTTTGCTTCTATGAGCCAACTCTTGTGTTTTCTG TGGCTTCATAATGGTTCCTGCTTGTTCAAAAGCAGAGTCTAGTGACAGTAAGTTCGCCAAGGCTTCCTTATGGTCTAGCTTCTTTACATCAGGTTATTCA GTCTGCGAAACATTTAGTGAATCACCGGCTTCCGGAAAAAAAGTAGTCAATTCTACAAATAGTGGGTGGGCAGCTTCTGTGAGGAAAGTCGTTACTGTTG GCTCAATGAGGAGATTTCAAGAGCGTGTACTCGGGCCGAGCAAGACTGAGGTTTCAAGCTCTGATGGTGATGTATGGCTTTTAGGTGTCTGCCATAAAAT TTCACAGCACGAATCAACAGGAAATGTAGACACTAGTAATTATTTCGCTGCATTTGAGGAGGATTTCTTCTCAAAAATCTTAATTACATATCGGAAAGGC TTTAATGCTATCAGTGATTCGAAGTATACTAGTGACGTCAATTGGGGCTGTATGCTTCGAAGCGGTCAGATGCTTGTTGCACAGGCTTTACTTTTTCACA AATTAGGTAGATCATGGAGAAAATCTGTTGACAAGCCACAGGATAAAGAATATATTGCCATCTTGCAACTTTTTGGTGATTCCGAGGCTTCTGCCTTTTC TATCCACAATCTTCTTGAAGCTGGTAAAGGTTATGGCCTTGCTGTTGGGTCATGGGTTGGTCCATATGCCATGTGCCGCACATTGGAAGTTCTAGCCCGT AATCAAAGGGAGAGAAATGACCTTGGATCGCAGCCACTTCCTATGGCCATTTATGTTGTTTCTGGAGATGAAGATGGGGAGCGTGGTGGCGCGCCAGTTG TCTGTATTGAAGATGCTTCCAGACGCTGTTCTGAGTTTTCACGGGGCCTGGCTGCTTGGACTCCATTACTTTTATTGGTTCCTTTGGTTCTTGGGCTTGA TAAAATCAATCTGAGGTATGTTCCATTGTTGCAGTCAACCTTTAAATTTCCCCAGAGCCTTGGCATCTTGGGTGGCAAGCCAGGTGCTTCAACATACATA ATCGGTGTTCAGAATGAAAAGGCATTCTACCTTGATCCACATGATGTCCATCCGGTTGTTAATATCAACGGGGACAACCAAGAGGCTGATACATCATCAT ATCATTCCAACATTATCAGGCTAATGCCCCTAGATTCAATTGACCCATCCTTGGCTATCGGATTTTACTGCCGCAACAAAGATGATTTTGACAATTTCTG TTCTCGGGCCTCGGACCTTGTAGAAGAATCCAACGGTGCACCGTTATTCACCGTGGCTCAGTCTCGAAGCTTGCCGATGCAAGTCAGCAGCAGCAATGAT GCATCAGGTGCCAACAGTGGATTCCAAGAAGATGATGCTCTTGGTTTGGACCTTGTCAATGATGCAGAAACCAATGAAGATGATTGGCAACTCCTATAAA CTCTCATGAGCATAAGTGCCACTGTGAGTTTGGCTGATTGGAAGAAAAAAAAGTAGCTTAAACTCATTATGATTCTTTGGGTTAAATTGTGCATTTGTTC ATATATCTAACCAGATATTTGTTGTACATTAGATGGTTACTACGTTTATATTTGTTTCTGGTATCCTTTTATTGGCTACATAGAAAGTAGTTCATGCTTT GATAGAATGTTTTCTTAAACAGCAATGCTATAGAACAAGAAAAAGTTGCACCAAAAATATTAATAAAGCCAATTATTTAATTTAGAGAGGGAATCT
• Tissue: pods
• Gene name: LI_gene_175718;
• Additional information: details;

Expression of Ll_transcript_499198

FPKM

• PAB: 9.3
• PNAB: 0.6
• PS1: 0.4
• PS2: 2.5
• PS3: 1.8
• PW1: 2.2
• PW2: 0.9
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_499198

• Blastp: Cysteine protease ATG4 from Medicago with 82.86% of identity
• Blastx: Cysteine protease ATG4 from Medicago with 82.86% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (MTR_7g081230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413862.1)
• Pfam: Peptidase family C54 (PF03416.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;