| Id Trinity | TRINITY_DN50241_c5_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_499188 |
| Sequence | GGAGTAGATTTATTTTCAAGCCATATATAATTAATAATTATAATGTTGTTTGATTTTATTTAAGGAACCCTTTGTCCCTTCCAAAGATACCTAGAGAAGG AAACATACACATTAACGAAGTCCCAACCAAGTCTCAAACTACGCTCTTCATCCTTTCTCACCTAACACCTCGTTCCTGCTTGTTCAAAAGCAGAGTCTAG TGACAGTAAGTTCGCCAAGGCTTCCTTATGGTCTAGCTTCTTTACATCAGGTTATTCAGTCTGCGAAACATTTAGTGAATCACCGGCTTCCGGAAAAAAA GTAGTCAATTCTACAAATAGTGGGTGGGCAGCTTCTGTGAGGAAAGTCGTTACTGTTGGCTCAATGAGGAGATTTCAAGAGCGTGTACTCGGGCCGAGCA AGACTGAGGTTTCAAGCTCTGATGGTGATGTATGGCTTTTAGGTGTCTGCCATAAAATTTCACAGCACGAATCAACAGGAAATGTAGACACTAGTAATTA TTTCGCTGCATTTGAGGAGGATTTCTTCTCAAAAATCTTAATTACATATCGGAAAGGCTTTAATGCTATCAGTGATTCGAAGTATACTAGTGACGTCAAT TGGGGCTGTATGCTTCGAAGCGGTCAGATGCTTGTTGCACAGGCTTTACTTTTTCACAAATTAGGTAGATCATGGAGAAAATCTGTTGACAAGCCACAGG ATAAAGAATATATTGCCATCTTGCAACTTTTTGGTGATTCCGAGGCTTCTGCCTTTTCTATCCACAATCTTCTTGAAGCTGGTAAAGGTTATGGCCTTGC TGTTGGGTCATGGGTTGGTCCATATGCCATGTGCCGCACATTGGAAGTTCTAGCCCGTAATCAAAGGGAGAGAAATGACCTTGGATCGCAGCCACTTCCT ATGGCCATTTATGTTGTTTCTGGAGATGAAGATGGGGAGCGTGGTGGCGCGCCAGTTGTCTGTATTGAAGATGCTTCCAGACGCTGTTCTGAGTTTTCAC GGGGCCTGGCTGCTTGGACTCCATTACTTTTATTGGTTCCTTTGGTTCTTGGGCTTGATAAAATCAATCTGAGGTATGTTCCATTGTTGCAGTCAACCTT TAAATTTCCCCAGAGCCTTGGCATCTTGGGTGGCAAGCCAGGTGCTTCAACATACATAATCGGTGTTCAGAATGAAAAGGCATTCTACCTTGATCCACAT GATGTCCATCCGGTTGTTAATATCAACGGGGACAACCAAGAGGCTGATACATCATCATATCATTCCAACATTATCAGGCTAATGCCCCTAGATTCAATTG ACCCATCCTTGGCTATCGGATTTTACTGCCGCAACAAAGATGATTTTGACAATTTCTGTTCTCGGGCCTCGGACCTTGTAGAAGAATCCAACGGTGCACC GTTATTCACCGTGGCTCAGTCTCGAAGCTTGCCGATGCAAGTCAGCAGCAGCAATGATGCATCAGGTGCCAACAGTGGATTCCAAGAAGATGATGCTCTT GGTTTGGACCTTGTCAATGATGCAGAAACCAATGAAGATGATTGGCAACTCCTATAAACTCTCATGAGCATAAGTGCCACTGTGAGTTTGGCTGATTGGA AGAAAAAAAAGTAGCTTAAACTCATTATGATTCTTTGGGTTAAATTGTGCATTTGTTCATATATCTAACCAGATATTTGTTGTACATTAGATGGTTACTA CGTTTATATTTGTTTCTGGTATCCTTTTATTGGCTACATAGAAAGTAGTTCATGCTTTGATAGAATGTTTTCTTAAACAGCAATGCTATAGAACAAGAAA AAGTTGCACCAAAAATATTAATAAAGCCAATTATTTAATTTAGAGAGGGAATCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175718; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_499188
| Blastp | Cysteine protease ATG4 from Medicago with 84.13% of identity |
|---|---|
| Blastx | Cysteine protease ATG4 from Medicago with 82.86% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (MTR_7g081230) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413862.1) |
| Pfam | Peptidase family C54 (PF03416.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |