| Id Trinity | TRINITY_DN50242_c1_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_498650 |
| Sequence | ATTGCACAGAGTAATAGTGCAGAAATTGCAGATGCCTTGTTTCGGTATACTGCACCAGAAGAGGTATGTAATGCTGAACTGTATGGTGCTGACTATTGAG CTTTTTTTCTTGCTTGTTTATTCAGTGTGATACTGCTGCTTTTTTTATGGGCAGGTGATGACCTTCCCATCAACTTGTGGTGCTTGTGTCACTCAGTGTG AGACTCGGATGTTTGTAACCAATATTCCATACTTCCAAGAAGTAATCGTTATGGCATCTACATGTGATTCTTGTGGTTATCGCAACTCTGAGTTGAAACC CGGTGGACGGATTCCTGAAAAAGGAAAAACAATTACTCTTCATGTAGAGAATGTCAAAGACCTAAGCCGTGATGTAATAAAGGTTTGTCATCGTTATCAA GATTTTGGCAGATCTCAAAAATGCATTCAATTAGTTAATTTTATTTATGTGGTGGCTAAATATTGGATCTTGTAGCTAGTTTTTGTGTGTACCACCTATT ATTGTTTTTATTATTTATTTCTAATGAGTAATTACTGTGCACTGGAAGCAATAAGAGATGGCTTTTGTTACTAGAAGAGACTTGGATTATTTATGGGATT GCTTGCAAGTTTGGGACAGGGCTACCTGCATAACAGCCATTCATAGGAACTAGGAAGTGTGGTCATTTGGAAGGAATCATGAAAAAAGATGTTCATGTGG ACTCTTCCGAAGATTCATTTTTAGAAATCGTAATTTGGCCTCTACTATTTAATTTAGTTTGTCCTTGAACTTGGATGAAACTTATTTTGTGGTTATTAGA AGCATGAAAGGTGGATTTTATGAAGAGCTGTGTCAAATTATGTCTCTCGATTTCAGTATGTGATGCTTTCCGTGATATACTCAGACTGATAGTTGTAATG ATATTTATATAGGTCTTTCTAGTGAAGATAAATCTGTGAAAAGATGTAGTGTTATATATTAATTCTGTCATCATTATATTTGTTCCTTTGCCCACTGCCG GGTTTCTGTTTGTCTGATCATTTATACATAATTAATCTGTGATTTGACACCTTAAAATATGATTTATATCTTTCCGTATACTCGTTTTCGCATTCTAAAA ATGAGAACTTTTCAAAGCATTAACTGAGTTGTTTTTGTTTTTATTAGTCTGATACTGCTAGCGTAAAGGTTCCTGAAATTGACTTGGAGCTGACAAGTGG CACTCTTGGAGGAGTTGTTACAACTGTTGAAGGTTTAATTACAAAAATTTGTGAAAGTAAGTATGCTCTATCACACATACACGCGTGGAATTGAAAAGGG AAAGACAACAAATGGTAGTAGTAAAATGCATACACATTTTGAGCTCCCCTTGAACAGTTAATTTTTTATTGATCTTTATCATCAAGAAATTCACCTGAAC ATCATTACATCTTTCAATCCAAATTGGCTACAGTAAATATATTGGAAGTTGGAACAACCTTCTGAAAAGCCAAAGTCGTATGTGTTTTTGCAAAGATGGA TTTTGTGTTGTTCTACTTTCACCACATATTTATGTTTTTCTTGCTCCCGTTGTGTGATTATTTTTAATACGAATTATATATCATTGATTAAATCTACAAG ATAATTTGATGTGTACAGGCCTTGAGAAGGTCCACGGGTTTACTTTTGGAGATAGTCTGCAAGAAGATAGAAAAAACAAATGGCTTGACTTTACGGCCAG GCTAACCAAGGTAGCACATACTATACAGAATAGTTTGGCACTTTGGCTTATTTCTTTTCTTATATGTATCGTCGGCTGAGTATAATTGCTCACATTATAA TTCAATAAATGCATAACCATCACGTGCCTTTGTTTATTATTCGTTCTTAACACAGTTTTGGGGCAGTTTTTTCTGGGGGATAAAAGTAGTAGTAATGGAT AACTTACATATTTTAATTCATCCGTGTTTCTAAGGGTAGATTGTCTTTTGGACTATGTCTTGTCCTTTTTTAGGTGGATCACATCTTTGAAAAAACTTAT TTGATTTATAAAAAGAGCTAAAATAATACAAAAGGAAGAAATAATCCAATGAACTATAAACCAAGGATTTGTCCTCACAAAGAGGAGCTCATAGTTTCTG AGTTACAATGGCCACTGGTCTTATTCTAGGCTACTTATAATTGTTCTGACATTGTCAAATTCTTTATCTCTGTCATACAATCAATATCTTATTGGCTTTG AGGGATTTATTTGACTCACCACTTTTTAAACTTATAGCTGCTTGGTCTTTGGCATCATTTCTCCCATCTACATCTTTTCATTCTGTGCAGCTTCTTAGCT TGGAAGAACCTTGGACTTTGATTCTTGACGATGCATTAGCCAATTCTTTTGTAGCACCTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_175726; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498650
| Blastp | Zinc finger protein ZPR1 homolog from Dictyostelium with 54.05% of identity |
|---|---|
| Blastx | Zinc finger protein ZPR1 from Saccharomyces with 50% of identity |
| Eggnog | zinc ion binding(COG1779) |
| Kegg | Link to kegg annotations (DDB_G0269438) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424241.1) |
| Pfam | ZPR1 zinc-finger domain (PF03367.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |