| Id Trinity | TRINITY_DN50242_c1_g1_i33 |
|---|---|
| Name Transcript | Ll_transcript_498667 |
| Sequence | AATCAGAATCTGCTACCATTAAGATACCAGAATTGGATCTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTACGTTTGATACATATCTT ACTCTATTTATCCTTTTCCCACCTAGCATTGTTGGTGTCCAGCTTTTTTGGCTTCTTTTGTCATTTCATTTTCCAGTATATATCTCTGCACATCCCTTCT TTGCAAGTCAAAACCGTAAGCATGGAAAATAGGATAAGCATGTTATCCTTTCTATTCTTTAGATTTTTGTTAGTGTTTATCAGAGGCAAAAATGTTGATC AGATTTCTGAAGCTATAGTTGTGACTTATCTTAACCTAGGTGGCTGCATTGTGTTACTTATTATTTACTAGCACTGATAATGGTCATATATTTTTTAATA GACATGTAGAATGTGGATGTTAGAGCTGTAATATTAAGTATTTTATGTACTTTCATGTCAAGGTCGTGATTAGTTCAGCATTTGTTTTCAAATGATTTGA GATTATTGGTTTCTGGTGTACTTATAGGTAGAAGGGATACTAATGCGAGCTGCCGATGAACTTCAAGCCCTTCAAGAGGAACGCAAAGTAGAATTTGTTA CTGTGCTATATTATTGTTTGGTATAAGTTTCTCTTTTTATAATTCAATGATTTTTTTATGTTCTAGAAAGTGTCTCCAGAGACAGCTGAAGCAATTGATC AGTTCTTGGTGAAATTGCGAGCCTGTGCAACAGGAGAGTCATCATTTACTTTCTTTCTTGATGATCCTGCTGGAAACAGCTTCATTGAAAACCCGTTTAC ACCATCATCTGACCCATCACTGACTCTCAAGTTTTATGAGCGAACTCCTGATCAACAAGCATTATTGGGATATCTCGTTGATTCAACACAGATTGCTCAT GATGAAGCACTAACAGGAGGTGAAGCTGGGGTATCTGGTCAAGTGAGGAGAGAACCACATGGGTCAATAGGGGCAGCAGCCGGTCATCGGGCTATTGCAC AGAGTAATAGTGCAGAAATTGCAGATGCCTTGTTTCGGTATACTGCACCAGAAGAGGTGATGACTTTTCCGTCAACATGTGGTGCTTGTGCCACTAAGTG TGAGACTCGGATGTTTGTTACCAATATTCCATACTTCCAAGAAGTAATCGTTATGGCATCCACATGTGATGCTTGTGGTTACCGCAACTCTGAGTTGAAG CCTGGTGGACGAATTCCTGAAAAAGGAAAAAGGATCACTCTTCATGTGAAGAATGTTAATGACCTAAGCCGTGATATAATAAAGGTTTGTCATCGTTATC AAGATATTGACAGATCTCCATACATGCACTCCATTAGTTAATTTTATTTATGTGTAGAGTGATTAAATATTGGATCTCATAGCTACTTTTGAATGTACTG GACCTATTTTTTATTCATTTATTTATTTTTATGGTTATTTACTATGCCCTAGAAACAATGAGAGATGCCTTTTGTTTTGAGAAGAGACTTGGATTATTGA TGTTATCATCTGCAAGCTTCGGACAGCAGCTATAACTATAAGCATCACAACCATTTGTAGGAACTGCTGTCATTTGGAAGGGATCAAGAAAAATGCTGTT CATGTGGACTCTTCAGAAGAGTCAGTTTTAAAATTGTATTTTGTGCTCCATAATTAAATTTAGTCCGTCTTTAAACTTGGATGAAACTATATTTTGTGGT TATTCCAAGCTTGAAAATGTGGGTTTTATCAAGAGCCGTGTCAATTTTTTATTTATACAGTTTTTTTCTTCATTTTTTTAAAAGGGGAGCGGGAGCACAG TTGCTGGGGTGTTGCTTTCAGTGATATACTCAGGCTGATAGTTGTAACTATACTTAAAAAGATGTGGTGGTGTTATATATTAATTCTCTCATCATTATTT TTGTTCTTCAGCCCAGTGTTTATTCTCTGTTTGTCTTGTCATTTAAACATTACTTGTCTGTGATTTGACACCTTGAAATATGATCTATATCTTTCCTGGG TCCTCGTTCCCGCGCGGAACTTGATTCATTATAGATATCCTCATATTTTTCTACACCCTTAACTGAACAATGTTAATTTTTTTGGTTCTATTAGTCTGAT ACTGCTAGTGTAGAAGTTCCTGAACTTGACTTGGAGCTGACAAGTGGCACTCTTGGAGGAGTTGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTG AAAGTAAGTATGCTCCCTCTCTCTCTCTCTCACACACACACACACTACCCTTTCTCTTATGGAGGCAAGTTAATTAATGTACTAATTGCTAACTTTTGTG GAATTGAAAAAGAAAAGACAACATATGGTAGTGATAGTATGCATACATTTTTTAACTCCCCATGAACATAGTCAATTTTTTTGTAGATCTTTCTAGTATC ATCTAAACATTCACCTGAACATCGTTAAATCTTTTGATCCAAGTTGTCTACATTAAATATATTGGAACAGCCTTCTAAAAAGCAAAAGTTTTGTTTGTTT TTGCGAAAATTGATTGTGTTGTTCTCCTTCCATCCACATATTTAACTTTTTTTTTATTCCTGTTGTGTGATTATTTTAAATATGAATTATATATCTTTGA TTAAATGTGATTTTCATGTACAGGCCTTGAGAGGGTCCATGGATTTACTTTCGGAGATAGTCTGGAAGAAAATAGAAAAACCAAATGGCTTGACTTTAGA GCCAGGCTAACCAAGGTAGCGTTATACAGAGTAGCTGGTTTTATTTATTTTCTTATATGTACCTCTGGACAGAGTATAGTTGCTCACATCATAATTCATT TACTGCATTACCATCATGTCCCATCTTTATTATTTGCTGTTTACACAGTTTCTTGTAAGGCATGTTTTTTTGGGGGAACGGGGTATAAAAAGTGTAGCAA TAAATGACATAGGTATTTAGTCCATTTTTGTTTCTACTTACATTTACAATCAATATCTTCCTGTCATTGAAAGGCTATATTTTGACTAAGTGTATTTTGA ATTTATAACTGCATGGTCTTTGATGCTATTTCTTTTGTCTTTCGTCTACGTCTTTTCATTTTATGCAGCTTCTTAGCTTGGAAGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175726; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498667
| Blastp | - |
|---|---|
| Blastx | Zinc finger protein ZPR1 homolog from Dictyostelium with 35.44% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420287.1) |
| Pfam | ZPR1 zinc-finger domain (PF03367.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |