| Id Trinity | TRINITY_DN50242_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_498640 |
| Sequence | GGATACCCAACTTCACACTTGGGCCTGTTATGACCCGACCTAACCCTAGTTATACTGCATTTTTGTTGAATTATTATTACTCAGAATTCTCTATTTCTCC AACTTCCATCACTACTTTGTATTCAGAAAATTGAAGGCATGGAGCAGATTGTGGACGTTGGATCTGTGGCTGAAGCAGTTTCAACAGATGTTGGCGACGC CCCTCTCTACGCCGTTGAAAGCCTCTGCATGCGTTGTGGTGAAAACGGGATCACCAGATTTTTGTTCACTTCCATTCCTAACTTCAGAAAGATTTTGTTG TCGGCATTCGAATGTACTCACTGTAATGAGAGGAACAATGAAGTTCAGTTTGCTGGCGAAATTCAATCGCGTGGTTGCAGTTTCTCTCTGCAGATCCCAT CGGGTGATCCAAAGATGCTCAATAGGCAAGTGGTAAAATCAGAATCTGCTACCATTAAGATACCAGAATTGGATCTTGAGATTCCACCAGAGGCTCAGCG TGGTAGTCTGTCAACGGTAGAAGGGATACTAATGCGAGCTGCCGATGAACTTCAAGCCCTTCAAGAGGAACGCAAAAAAGTGTCTCCAGAGACAGCTGAA GCAATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCAACAGGAGAGTCATCATTTACTTTCTTTCTTGATGATCCTGCTGGAAACAGCTTCATTGAAA ACCCGTTTACACCATCATCTGACCCATCACTGACTCTCAAGTTTTATGAGCGAACTCCTGATCAACAAGCATTATTGGGATATCTCGTTGATTCAACACA GATTGCTCATGATGAAGCACTAACAGGAGGTGAAGCTGGGGTATCTGGTCAAGTGAGGAGAGAACCACATGGGTCAATAGGGGCAGCAGCCGGTCATCGG GCTATTGCACAGAGTAATAGTGCAGAAATTGCAGATGCCTTGTTTCGGTATACTGCACCAGAAGAGGTGATGACTTTTCCGTCAACATGTGGTGCTTGTG CCACTAAGTGTGAGACTCGGATGTTTGTTACCAATATTCCATACTTCCAAGAAGTAATCGTTATGGCATCCACATGTGATGCTTGTGGTTACCGCAACTC TGAGTTGAAGCCTGGTGGACGAATTCCTGAAAAAGGAAAAAGGATCACTCTTCATGTGAAGAATGTTAATGACCTAAGCCGTGATATAATAAAGGTTTGT CATCGTTATCAAGATATTGACAGATCTCCATACATGCACTCCATTAGTTAATTTTATTTATGTGTAGAGTGATTAAATATTGGATCTCATAGCTACTTTT GAATGTACTGGACCTATTTTTTATTCATTTATTTATTTTTATGGTTATTTACTATGCCCTAGAAACAATGAGAGATGCCTTTTGTTTTGAGAAGAGACTT GGATTATTGATGTTATCATCTGCAAGCTTCGGACAGCAGCTATAACTATAAGCATCACAACCATTTGTAGGAACTGCTGTCATTTGGAAGGGATCAAGAA AAATGCTGTTCATGTGGACTCTTCAGAAGAGTCAGTTTTAAAATTGTATTTTGTGCTCCATAATTAAATTTAGTCCGTCTTTAAACTTGGATGAAACTAT ATTTTGTGGTTATTCCAAGCTTGAAAATGTGGGTTTTATCAAGAGCCGTGTCAATTTTTTATTTATACAGTTTTTTTCTTCATTTTTTTAAAAGGGGAGC GGGAGCACAGTTGCTGGGGTGTTGCTTTCAGTGATATACTCAGGCTGATAGTTGTAACTATACTTAAAAAGATGTGGTGGTGTTATATATTAATTCTCTC ATCATTATTTTTGTTCTTCAGCCCAGTGTTTATTCTCTGTTTGTCTTGTCATTTAAACATTACTTGTCTGTGATTTGACACCTTGAAATATGATCTATAT CTTTCCTGGGTCCTCGTTCCCGCGCGGAACTTGATTCATTATAGATATCCTCATATTTTTCTACACCCTTAACTGAACAATGTTAATTTTTTTGGTTCTA TTAGTCTGATACTGCTAGTGTAGAAGTTCCTGAACTTGACTTGGAGCTGACAAGTGGCACTCTTGGAGGAGTTGTTACAACTGTTGAAGGTTTAATTACA AAAATTAGTGAAAGTAAGTATGCTCCCTCTCTCTCTCTCTCACACACACACACACTACCCTTTCTCTTATGGAGGCAAGTTAATTAATGTACTAATTGCT AACTTTTGTGGAATTGAAAAAGAAAAGACAACATATGGTAGTGATAGTATGCATACATTTTTTAACTCCCCATGAACATAGTCAATTTTTTTGTAGATCT TTCTAGTATCATCTAAACATTCACCTGAACATCGTTAAATCTTTTGATCCAAGTTGTCTACATTAAATATATTGGAACAGCCTTCTAAAAAGCAAAAGTT TTGTTTGTTTTTGCGAAAATTGATTGTGTTGTTCTCCTTCCATCCACATATTTAACTTTTTTTTTATTCCTGTTGTGTGATTATTTTAAATATGAATTAT ATATCTTTGATTAAATGTGATTTTCATGTACAGGCCTTGAGAGGGTCCATGGATTTACTTTCGGAGATAGTCTGGAAGAAAATAGAAAAACCAAATGGCT TGACTTTAGAGCCAGGCTAACCAAGGTAGCGTTATACAGAGTAGCTGGTTTTATTTATTTTCTTATATGTACCTCTGGACAGAGTATAGTTGCTCACATC ATAATTCATTTACTGCATTACCATCATGTCCCATCTTTATTATTTGCTGTTTACACAGTTTCTTGTAAGGCATGTTTTTTTGGGGGAACGGGGTATAAAA AGTGTAGCAATAAATGACATAGGTATTTAGTCCATTTTTGTTTCTACTTACATTTACAATCAATATCTTCCTGTCATTGAAAGGCTATATTTTGACTAAG TGTATTTTGAATTTATAACTGCATGGTCTTTGATGCTATTTCTTTTGTCTTTCGTCTACGTCTTTTCATTTTATGCAGCTTCTTAGCTTGGAAGAACCTT GGACTTTAATTCTTGATGATGCACTGGCCAATTCTTTTGTAGCACCTGCAACTGATGATTTAAAAGATGACAAACAATTAATGTGTAAGTTTCTCTTCAA CATACAACTAAAATTGAAACTGCTTTGTCCTTGGCCTGGTCCACTTGTGGCACACAAGGGTATTCTGCACCATCAGGTCAAGCTTTAGTTATTGAGATTA TAGTTTTTTATGTTTTCTCAACAGAAGGTTAAATTAAAATGAAAGCATATATACGACGCCGTTCTCGATGTACTCATTATTGATGGAATATTTTTTTCTT CATTGGGGTAAAATAGATTGTGTCAGGTTTCAATTGAAGTACCACCATTGAAACAACCAAAAAGATTTATTGAACGTGCAATGATGATCTGATTGCTTTT GACATTTGAGCATGTGTTTGAACCTTTTACTTTATTAAACAACATCTATGCGCCCTTGTGAACATGCATAATTGGAATGGTGTGAGAAGTGGATAGATTG ATTTCTACTATATGAAATTATGAATGCAACGTAATATCATACCTGTATGCAAACTTCTTTATATTTAATATACTCATGTTTTGACTTATCTATTTTGGTG ATTTTGTCAACATGGTATCTCCAGTTGAAGAATATGAGAGATCATGGGAGCAAAATGAAGAACTAGGTCTGAATGACATTGACACTTCTTCTGCCGATGC TGCTTATGAATCAGCAAATACTACTAAAATTGAGTGATTGGAGGGTGTCCTCCGTCGAACGGACCTCACCTAGTGAAATTTAAGGCTTGGTTGTTGACGT GTTTTCCTTTCTTTCCCACCCTGGGCCAAGAAAGGAAGAATTTTTGTGTTAGTATGGTATATGGGGTCAAATAGAATGTCAGAGGTCTTGACCCTAGTGT AAAGGCTGAATGGTATAATGTATGTGATAGTATTTCATCAAATACTTTGATATTTTTAACTTATACTGTTCAATTATTCCAGTGTTATTATTCCTTTGCA ATTTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_175726; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498640
| Blastp | Zinc finger protein ZPR1 from Saccharomyces with 41.23% of identity |
|---|---|
| Blastx | Zinc finger protein ZPR1 from Saccharomyces with 41.47% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YGR211W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420287.1) |
| Pfam | ZPR1 zinc-finger domain (PF03367.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |