| Id Trinity | TRINITY_DN50245_c1_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_498945 |
| Sequence | GTTTACGTCATTAGTAATACATGTGTGGGGAATAAATGTTTGTTTGGGTTTGACTGAAGAGTGAAGATAATAGAAGCTGAGACTGAGAAGAAGAAAAGAA AAAAATGGGGAATCCAAACGTAAGTGGTGTTGCTGAGGTTACAGAAAATTCGATTAACTCCGATTCTGATTTGCACGATTCACCTCCTTACGCTGAAGGA GAAAAGGTTTTCGCTTACCACTCTACTCGACTCTATGAAGCCAAGGTCAAGCGATTGGATTACAAGCAAAACAGTTGGAAGTTCTATGTTCATTATCTTG GTTGGAAGAATAGCTGGGACGAGTGGGTTGGTATGGATTGTTTGATGAAACACACGGAGGAAAGTAAGCGTAAAAAAGACGAGATCGATGAGAAGCTTGG GAATGACAAGAATACAAAATTCGCCCGTGCAGCGAAGACTTCAAATGCAGCAAAAGGCAGGAAGCGAAGGAATGAATCTACGAGTAAGGGAAAGTCTGAA GCAAATCCTAATAAGCTTATCACTATTCAGATTCCGCCTACACTAAAGAAGCAATTGGTTGATGATTGTGAATTTATCACGCATATGGGCAAGCTCGTTA AACTTCCTCGTACTCCTAATGTGGATGACATATTGAAGAAGTATCTCGATCAGAGATTGAAGAAACATGGCTCGGTGGCAGATTCAGTGGAGGAAATAAT GAAAGGACTGGGTGCTTACTTTGATAAAGCACTTCCTATGATTCTTCTATACAAGAACGAACGTAATCAGTACCAAGAAGCGTGTCCGAATAATATCACC GCTTCTAGTGTATATGGTGCTGAACATTTGTTGCGTCTCCTTGGTACGCTAATTTGTCTGTGCTAGACGAGCATATTATATCATATAGAATTTTATGTTT TATGTCTTTGGACTTTGCAATGGAAGGTGGGTAGAAGGGTCTTAAGATTAAATATTCTTCAGTCTGTCATGACACTTGCTAATTGTTTCACTCACCAATG GAAATATAGTTGGCCATGGTTCTATTCTGCCCAGACTGGACAGAAAAATGCTGGTCTTTTGGACCCAGCCTTACTTATCGGCTTACTGCTATGATCTCGT AGTTTTGTAAAGTTTGCATTTTGTAAATCTTCATTTTTAGAATGTACAACACTTTGTGATTCTAATCATGGGTGCAATTTTTTTCCTGGATTTGAAGTCA AGTTGCCCGAGCTAATGTCTGATGCTGGTATTGAAAAGGAGACAGTGACAGAAATTCATGAACAGACAGTTGACTTTCTCAGGTTCTTGCAAAGAAATCA GAGCACATTTTTCCTTTCTACTTATCATGTTCCTGAAGATATGGAGAACAAAAACAACTAACAAGGTGAGTAGAGTGGGGGACAACATCTATTTGCATGG TACAAAACTTATAGCTGTGCTGCAACATAGAAGGCTTGTCTGTTATCAAACTGCAGAATTTTTATACAAAATGCTGTGAATTTGGATTCTGTTAATAATA GTCATGAAAACCCTATATCTCCAGGGTACAGAGAGAGTATTAAACAATGAAGGCATATGCTCCTGACCTTCATTTTTATAGTCCTATTTCTGAATTTGGA TTAGACTTAATCTGTTTTTAAAATTAAGTTTGTGATTTCATAGTCCATGTCAAACATGAGAACTTTGAAAGGGGTTTGAATATAATGTGCAATTTATGTT TTTATTAAAAAATAATACCGTAAGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_175745; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498945
| Blastp | Protein MRG2 from Arabidopsis with 45.65% of identity |
|---|---|
| Blastx | Protein MRG1 from Arabidopsis with 47.47% of identity |
| Eggnog | Mortality factor 4-like protein(ENOG410XR9F) |
| Kegg | Link to kegg annotations (AT1G02740) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003523982.1) |
| Pfam | RNA binding activity-knot of a chromodomain (PF11717.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |