Ll_transcript_497485

• Id Trinity: TRINITY_DN50254_c3_g1_i2
• Name Transcript: Ll_transcript_497485
• Sequence: CGAGTGGATGAATATGGTCTCGGCCCAAGAGAGAGCTTGGCTGAAGCTGTAAATACAGTCATCAATCTTCTAGGAATGCAGCCTTGTGAGGTAAGCCAAT GTATCGATTGCTGCATCGGTTAATGTTTCTTGTTATGTGGCCCTTTTTATTATACTGGTTATGAGCTGTTTGCACTATTTTTACTGCAATTTAATGCTCT GCTTGTTAGGTTCTGCCAAAAGACCATTATAATGTTGCTGTCTATCAAGATTAGATGACAGATTTGTTTTTATGTATAATTTATTATCAGGAGTTAGTGT TCTCTTAATATAATAGTACTTTAAGGTGCATATCCTTTGAAGTTGAACTGTGACATTGGCAAACTCAAACCACAAAGATGTCCTTGTGTGTGTTTAAGAT GTTGTTTGGGCAGAATACTTTTGGTTGGATATGTGTAGCCACACACATGCATAGTCAGACTTCAAAGACATTTTTAGGTGCATGGGGGTTATTTGGTTAA GAGACTTCTCCCCCTTGCACAAAGATCATGCCCAGGTGATTAGAGTTTGATTTAACTAACATGTAGATGCGGATGCAAATACATTTGACACATTTAAAAT ATCATAGTTCATTTGAAAGCTATGGATGTTGAACTTTGTGACATTGACAAACTCCAACCATGAGGTGGTTATGGATGCGCACATAAATACTGTTGTATGC ACAGAGAATATAAATTAGATGAGATTTTTAGGTGCTGATGGGAAGGCATTTGTCTTGCTGCATGAAGCACTTGAGAATCAGTTATTCATTGGTATCTCAT ATTCACTGGTATATTGGAGGAAGGCAATAACTTTCTAATAATTTTTATTTGTTCACTATGTGCAGGGCACAGAAGTTGTTCCACCCAATTCAAGGTCACA CTCGTGCTTATTGTCAGGTGTATTCATAGGGAATGTGAAGGTGCTTGTGCGATTGTCTTTTGGACTTGACGGCCCAAAGGAGATTGCAAT
• Tissue: pods
• Gene name: LI_gene_175824;
• Additional information: -

Expression of Ll_transcript_497485

FPKM

• PAB: 0.3
• PNAB: 1.1
• PS1: 0.4
• PS2: 0.6
• PS3: 1
• PW1: 0.8
• PW2: 0.7
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497485

• Blastp: -
• Blastx: Coatomer subunit gamma-2 from Oryza sativa with 85.71% of identity
• Eggnog: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity)(COG5240)
• Kegg: Link to kegg annotations (4342665)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416472.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;