Ll_transcript_496659

• Id Trinity: TRINITY_DN50255_c0_g2_i2
• Name Transcript: Ll_transcript_496659
• Sequence: CTACACCGTTGATTAACCCTTGATTATCATTAAAATAAATCAACGGTTCACATGGACTAGCCTCGTTCTCACGCGGAAACCTTTCTATAAATACCCTTCC AAGCCCTATTTCCTTTTCACTCAGCCACATTCACAGCACTCACTTTTCTCTACCTAGAAATCTATTAAAGAAGTAAACCCTCTCTTCTTTCTATAATGGC TAGTTACGCAATTGTGCTGATGCTACTTTCTGCATTGTTGGTGAGTGTCACCGTTGCTAATTCACCGTCGTCAGCTCCGGCTGCGTCACCGACCAAGTCT CATGTTCCTAAAGCCACGTCTCCCAAATCTCCTTCTCCGGCGGTTTCTCCATCTGCTAAGTCACATGTAGCTTCTCCTCATTCTTCTGTCGTTAAAGGTC ATTCTCATCCACCTTCCGCCGCCGCGAAATCTCCTGCATCTCCGGCTACTTCTGTCTCGCCAGCTGGTGCTCCATCCACTTCTTCATCGATCTCTGAGCC TCCTTCTTCTCTAACTCCGGCTCAAGCACCAGGCAAAAATGGCGCCGCTTTGAACAGAATCAGCTTCGCTGGATCTGTCGCTGTTGTTGGTTTCGCTGTG TTGATGATGTAGACAGTTACATGGAGTTGTGTTTTGTTTTTTGTGGTTCTGTCTTTGCGGTGTGACGATTCATTCATTTGATTACTTTGTGTATTTTATA TTCTTATCTATGAGTGAAACATTTTTATTCTTCGGTACTTCTCTTATTGTTGAGATGTAATGTGTTTTCAATTATAATTTGTTATTATATCTCTGCCCCT GCAATTTCTCAATCCAAATCCACCAAGATATTCCCCTTACCTGATCCGAAATCAAAGCCTAAAGCCAGTGTAGATGATAAATCAGTCAAGGATAAGAAGT CCATATGGAATTGGAAACGATTAAAAGCCCTTTCCATAAACTGTAGTTGAAAGTTTAATTGTTTTTTTTCTATCCAAGTGCATTTGATTGAAGGGTTGCC TTTGATTTTCAATGATGCTAGCCTTTGTGTGTACTGGAAGAGGCAGGATGAGGTTATGGTGACCCATCCGGCCAAGGTGATACAATGTATGGCCGAGTTT GAAGAGATATTGACTCACACTTGCTCAATCTCTGGAAGTAGGAGTGCCCCCCATAACTCTGCAAAATATGAAGTAAAACATGTTTTGCTCTATGCTTCTA TGGTTGGTGCGCCAGAACTTGATTTAGGGAAGCACTGGGTAGACCTTGCGAGGTTGCTTCCTCTCACACTGGCTATGGATCAAAGAGTTTGTTTCATTGG ATGATCTTGCTCTGCTGGCTATGGATCAAATTGAAGCACTTTCAAAGGTTGGGTTGAGAATACAATCTAGGATGTCGGAGGAGGATGAATCATCAAACAT CACTGCACAATCCGTTGGAGAAATTTTAACACTTCAGAGCGAGGGTGTTAATATTAGTTGGTCCCTTGCTCGGGGTGGAGCTGCTGCTTTGCAGTTGTTG GATCTAAAAGATAGCAGTGGAGGCGTTGATGGGGTAATTGGCCTATCATTAACTCTTGATGAATGGATGAGAATAGATTCTGGCGAATTTGATGATGATA AAAATAGTATCAGTGAGCAAGCTTCCAAAGTTCTTACAGCCCATCATGCTAATAACTCTTTTGACTTAATTCATACGAGCTCCGAGGGAGAGAGGAAACA ATGTAAAGGCCCTGCAAGGAAATGTGGTTTGCTGGGAAACAACTTCACAGTAGAATTAATGGTGCAACTCCGTGATCCTATGCGAAATTATGAGCCTCTT GGAACACCAATGCTTTCTATTGTACAAGTTGGGAGAGAATTTGTTCCACCAAAGCAAAGAATTTACAGCAGTGTGTATGAGGCAGCGAACAGTAATGATG GAGACGACGAGTGTGAAATAGTGACGAAGATGGAGATGAAGGAGAGAGAGAAAGGGGTTAAATTTTCTGAAGAGAAGGGCATTCCTCAATCCAGCAATAC TAAAGTCCATGTTGCAGGTTTGAAAACCAAGCCTCATAAAAATAAAGTGAGGGGCTCTTCAAGTCAGCAACAGTCTGGTTCCCGATGGTTGCTGGCTAAT GGAATGGGAAAGATCAATAAGCATCCATTAATGAAATCAAAGGCTGCAACCTGGTGATAGGGTGATGGAGCATTTTATCTCGTAGTTATGGTATTGGAAC AAAATGGAAGGAATTGGTTACTTGAATCCACATACAAGAAATCCCAATATCATT
• Tissue: pods
• Gene name: LI_gene_175838;
• Additional information: details;

Expression of Ll_transcript_496659

FPKM

• PAB: 4.8
• PNAB: 5
• PS1: 5.1
• PS2: 3
• PS3: 5.5
• PW1: 4.8
• PW2: 5.2
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_496659

• Blastp: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 53.76% of identity
• Blastx: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 47.78% of identity
• Eggnog: NA(ENOG410Y9MA)
• Kegg: Link to kegg annotations (AT5G20610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463634.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;