| Id Trinity | TRINITY_DN50261_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_498133 |
| Sequence | CTTTCACAATTTGGGGATACCCCATACCCCATTCCGGTCTCTTTTTTCTGTATGTAGGGAGAGAAGCAGAATGTATTGTACTTGTTGCTGAGTCAATGTC ACATGATGGCCTAATTTCTATCTTTTTACTTCCTTGGGCTACTTTTACAGTGTGAAGTGGATTTCAATGACACGAGCAGCTGGGAGTATCTTTGCAAGGT GTATTGGACATCTTTGAAGCGGGACCTGTCTTTAACAATGGATGAGATCCTTCAAGCTAAAAACCCATGGAAAGGTGCTGCTCCGAGTTGTAAGGTTGGA ACTCCCCATGAACTTTATCATCTTAAAGACGAGAAAGGTTCTGGATCTGAGAACTCCTGTATAGACACAGAATCAGATAATTCAAATAACAAGAAGCCTA AGAGAAGCGATGAACAGATACATATTGTGGATGGTGTCTTGAATGATGTTGGGTGCCGTACACAAGACTTGCTCATTACCCGTGAGCTGATTGGTGGTAT ATGTATACACGAGAATCAGATCAACCCTAATGATGCATCACCTGGTGATAGCACTAATATAGGAGTTGTGAGATCAGAAGCGTCTGGTGTTGCATTGGAC ATGTCGTCATTGCATATCTCTACAGGGGTTGAGCAACCACTTGGTGATTCTGTGAATGGTAAATTGTGGCATTACCTGGATCCAACTGGGAAGGTTCAAG GACCTTTTTCTATGTTGCAGCTGTACAAGTGGAAAGAAAGTGGACATTTCCCTTCGGATCTCAGAATATGGAGGATAGATGAGAAACAAGATTTCTCTGT ATTGTTAACAGATGCCCTAGATGGGAAGTGTTCCAGAAATGTGTCATTACCATACAACGGCCAACTGCTGTCCTTACGGCCCAGCGTTACTTTGGATGAT AAAGATAATAGTCACGATATTGGGAGAATTGCATCAGGGAATGAAATTCACACAGACAGTCTAGTTATCGAAAAGAGTGGGGAGCAAAAGGTGGATGGTA GTTGTACACAGTCCAATGGTAAATATGAATCTATTAGGAGCAATGGGATTAGCAATGGGGGGCAAAGTGGAAACTTTCTAAGGAGAGAGGAGTCATGGAA CTATGGATTTTTTAGTCACAACCATCCCGATGTATATCCTTCACTGCCTTCAACTGCCTTTTCGGATAAATTACTGGAAGGTCTTGGGATTGAGGCAAAC CCAGAAGATAATGAAAATCATGGCTTGAATAGGACTTCTGAAGGTCCGAGTAATAGTGGGCAGAGTTATCAGAAACAATCAGATAGTGAAGAGAATTCGA GGCAATCTTCTGGACAGAACTGGGAATGCTCTCAAGTAATTAATCCAGTGTCTAATGCGTCGACATGGCTGGCAATCTTTGGTGAACCTACTGATTGTGA TGAATCAGTTTCAGATCTGTTGGCTGAAGTGGAGGCAATGGAGTCACGTGGTGCTGGCACGGAATCTCCCACTTCAATCATGAAAAGTGGTGAGGAATTG ACTGACAGTTCTAAAACAGATTTTCTCAGTTTTGTAGGTGGGTTTAGCACAATGCTTGAAGCAGGTAAAGGTGATGCACTGAGCTCCACTGGTGATTTAC ACTTTCCATCTCCATCAACAGCCGCAGCGGAACCATTTCGTCAAACTGATGCATATCATAATCCTCAAAGAATATCTGGGATGAATTCCTCAAAAAGTTC TGAAGATGATGAGGTCAGTAGAAAAAATACTATTAGCCTCATCTAATATATCTTTTGGAAATTTGAAAGGTTTACTTTTAGTTGAGTAGAGACTAATCTA TTAATCTTGTGCAGTCAACTTTCTTAACAATTGGCTGGAATCCTACCACCTGGGATCCAAAATGTAAGTTGATTCATTATCCCCTTTTCTAGGCATAACT ACTATTTTCTAAAGTTGGCATCTTTTATAATTAATGCTTGATTTCATAACTCACTAGATTTGGACATTTTAGTAAAAATAGTTCTTTTGATTTGCAGGTT AATGTGATAACTGATAGATCACATTGGAGGCCATTCTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175871; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_498133
| Blastp | Zinc finger CCCH domain-containing protein 44 from Arabidopsis with 49.11% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 44 from Arabidopsis with 47.83% of identity |
| Eggnog | GYF domain-containing protein(ENOG41120EC) |
| Kegg | Link to kegg annotations (AT3G51120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423782.1) |
| Pfam | GYF domain (PF02213.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |