Ll_transcript_498140

• Id Trinity: TRINITY_DN50261_c0_g1_i16
• Name Transcript: Ll_transcript_498140
• Sequence: CTCGGTCACCGTGTTTCTTCAATCTTCACACTCAAAGACACAACACAACACAACACAACAGAGTCATAGAATCAGAGTTTCTCTCTCTAGTGTCTTAGCT TGTGACACGAAACTACCAACACAACAAACAATGCGTTGTCACATCTGAACACGGTTCATTTCTAAGTCCATGTGCCAATTCTTCTTCTTAATTCAATTCC CCACTCCAATAGGGTTTTCACTTTCTCTCTCTCTCTAAAAAAAAACTCATCTTTACTTCTTCTTTCTCTTCAATTCAATTTAATTCAATTCTTCTCATAT CATGGAACACCAACCACTCCTTGCTCAAGGTTCTGCGGATTTGATGGAGGTTGTCATGAACGACGCCGTTTTGAAAAATAAACGTGGTCGTCCAACTAAA GGTACTCAGAAAACGACACCGTCTTTGTCAAGGCCCAAGAAGGAAGAAGATGTTTGTTTTATTTGCTTTGACGGTGGAAGCCTCGTTCTCTGTGATCGCC GGGGTTGCCCTAAAGCATATCATCCTGCGTGTATTAAACGAGATGAAGCTTTTTTCAGTTCAAAGGCCAAATGGAATTGCGGTTGGCATATATGCAGTGT TTGTCAGAAGGCATCCCATTATATGTGCTATACTTGTACATATTCTTTGTGCAAGGGATGTTCGAAAACTGCTGATTTTCTCAGTGTCAGAGGAAATAAA GGTTTTTGTGCAATATGCTTGAAAACTATAATGCTGATTGAGAATAATGCTCAGGGAAATAATGCAATGTGTGAAGTGGATTTCAATGACACGAGCAGCT GGGAGTATCTTTGCAAGGTGTATTGGACATCTTTGAAGCGGGACCTGTCTTTAACAATGGATGAGATCCTTCAAGCTAAAAACCCATGGAAAGGTGCTGC TCCGAGTTGTAAGGTTGGAACTCCCCATGAACTTTATCATCTTAAAGACGAGAAAGGTTCTGGATCTGAGAACTCCTGTATAGACACAGAATCAGATAAT TCAAATAACAAGAAGCCTAAGAGAAGCGATGAACAGATACATATTGTGGATGGTGTCTTGAATGATGTTGGGTGCCGTACACAAGACTTGCTCATTACCC GTGAGCTGATTGGTGGTATATGTATACACGAGAATCAGATCAACCCTAATGATGCATCACCTGGTGATAGCACTAATATAGGAGTTGTGAGATCAGAAGC GTCTGGTGTTGCATTGGACATGTCGTCATTGCATATCTCTACAGGGGTTGAGCAACCACTTGGTGATTCTGTGAATGGTAAATTGTGGCATTACCTGGAT CCAACTGGGAAGGTTCAAGGACCTTTTTCTATGTTGCAGCTGTACAAGTGGAAAGAAAGTGGACATTTCCCTTCGGATCTCAGAATATGGAGGATAGATG AGAAACAAGATTTCTCTGTATTGTTAACAGATGCCCTAGATGGGAAGTGTTCCAGAAATGTGTCATTACCATACAACGGCCAACTGCTGTCCTTACGGCC CAGCGTTACTTTGGATGATAAAGATAATAGTCACGATATTGGGAGAATTGCATCAGGGAATGAAATTCACACAGACAGTCTAGTTATCGAAAAGAGTGGG GAGCAAAAGGTGGATGGTAGTTGTACACAGTCCAATGGTAAATATGAATCTATTAGGAGCAATGGGATTAGCAATGGGGGGCAAAGTGGAAACTTTCTAA GGAGAGAGGAGTCATGGAACTATGGATTTTTTAGTCACAACCATCCCGATGTATATCCTTCACTGCCTTCAACTGCCTTTTCGGATAAATTACTGGAAGG TCTTGGGATTGAGGCAAACCCAGAAGATAATGAAAATCATGGCTTGAATAGGACTTCTGAAGGTCCGAGTAATAGTGGGCAGAGTTATCAGAAACAATCA GATAGTGAAGAGAATTCGAGGCAATCTTCTGGACAGAACTGGGAATGCTCTCAAGTAATTAATCCAGTGTCTAATGCGTCGACATGGCTGGCAATCTTTG GTGAACCTACTGATTGTGATGAATCAGTTTCAGATCTGTTGGCTGAAGTGGAGGCAATGGAGTCACGTGGTGCTGGCACGGAATCTCCCACTTCAATCAT GAAAAGTGGTGAGGAATTGACTGACAGTTCTAAAACAGATTTTCTCAGTTTTGTAGGTGGGTTTAGCACAATGCTTGAAGCAGGTAAAGGTGATGCACTG AGCTCCACTGGTGATTTACACTTTCCATCTCCATCAACAGCCGCAGCGGAACCATTTCGTCAAACTGATGCATATCATAATCCTCAAAGAATATCTGGGA TGAATTCCTCAAAAAGTTCTGAAGATGATGAGGTCAGTAGAAAAAATACTATTAGCCTCATCTAATATATCTTTTGGAAATTTGAAAGGTTTACTTTTAG TTGAGTAGAGACTAATCTATTAATCTTGTGCAGTCAACTTTCTTAACAATTGGCTGGAATCCTACCACCTGGGATCCAAAATGTAAGTTGATTCATTATC CCCTTTTCTAGGCATAACTACTATTTTCTAAAGTTGGCATCTTTTATAATTAATGCTTGATTTCATAACTCACTAGATTTGGACATTTTAGTAAAAATAG TTCTTTTGATTTGCAGGTTAATGTGATAACTGATAGATCACATTGGAGGCCATTCTTCTCTTATCCTGTCTACAAAAGAGGTCTTGTGGCAGGTTTAGGT GGATGAATGATGATACTGCCCTGTTTATAACATTCTTTGGAGGGTCTTGGTAGACATATCTCACCAACTTATTAGTCAGCTTTGTAATTTCATTGAATTT TAATGTGTAGAACTTCTTACTGTCACTCAAAAAGAAGGGACTCCCTCAAATTTTCTGAGACATTTATGGCCTAGACAAAATGCAAACATGCAACTTTGAA CCCTGATTTGCAACTATAATTTCCCTACTGCCCAGTTTAATTTTTACTTCTGACATGGTAGTGAGGATAAAATTTGTTGTCTATATACTACTCCATGTGT CACTTTGACCATTTTGGTAATACATTTTGGAATAACAAATTCATTATTGGGAGATGTTTTCGCAATGATTATTGAGATTATCCTAGTAGTTTTCAATCTA CCAAGTAAATAAGCTTTGAATACAATTGAGTTACG
• Tissue: pods
• Gene name: LI_gene_175871;
• Additional information: details;

Expression of Ll_transcript_498140

FPKM

• PAB: 1.4
• PNAB: 0.2
• PS1: 0.5
• PS2: 0
• PS3: 0.1
• PW1: 0.5
• PW2: 1.8
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498140

• Blastp: Zinc finger CCCH domain-containing protein 44 from Arabidopsis with 62.3% of identity
• Blastx: Zinc finger CCCH domain-containing protein 44 from Arabidopsis with 62.3% of identity
• Eggnog: GYF domain-containing protein(ENOG41120EC)
• Kegg: Link to kegg annotations (AT3G51120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423782.1)
• Pfam: GYF domain (PF02213.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;