Ll_transcript_497866

• Id Trinity: TRINITY_DN50265_c0_g1_i1
• Name Transcript: Ll_transcript_497866
• Sequence: ATTCCTGGCTTGGACAAGATTGCTTCCAATGGGATGATACATGTGGGAAACCAAAAAAATATATTCTTTGTGTACTATTATTATTATACGCATAAATTAG TTCAATTTGATATGTAACTAAATAAGGGTCTGAACTGGAAAGAGAAAAGTATGAGATAATTTAACCTCTCTTACTAAGAAGATGGCCCAAAAAATACTGG GAGTCATTTCTCCAAATAAGTAACAATAATCGAGCTGAACAGTGAATCTTAGATTTGTACGAGATATCTTTTATTCAAATTTTATTATGTAAGTTAAATT CTTTTGGCATGCAATGGGTAATCATTTTTATTACATCATCGCAATTTCTCTCGAGCCTCAATTTTGTTCAAACTCTGACATACAAGCTTCATATAATTAA ATTAGGGGTCTAAATATTTTTCTCACACCAGACATACAAAATTTAAGGACTGCCATGAATCAACCTCCTCTTATTTTTTTTTCATTTACTCTGTTTTTAT TGCGGTAGAAAGATTCATGGAAAATGATTGACTCGTGGTTTTTAGGTTTTTGTGTTTTTTTTATGCTACAACCTGCCTATGTATGCTTGATGTTAGATAT AGTCGGTCGTGAGTCCGAATAAAAGGTGAAGGTATGGATCGGTGATGTTTGTTGGCTTATTATGGTTTGAGATAGGAGCTGAGTTAGAATATATTTGTTG AAAAGGCTAAAAAAGAGCAAACTTTTATTTATGGTGGACAAGTAAAGAGTTAACATTTTTGCAAAAAAGTTCTGCAAAAAACTCTACTTTATAAAACTTT GGGTGAGCATTCGGCAATAGCCCGTCGGTACTATTTTTTAACAATGTGACTAGAGTTGGCCCTGAGTAAGACTATACTAAGTCATGCAATGTGGCTTTAT AATGTGCTTTAGCATATAATTATTTATTAAACTTTTTAATATGGGAAGTTTCAATTTCAACTACATGTTAATGGTGGGTCTGGCTCCATTCGGTTTCAAC TACATCTTAATGGCGGGTCTGGGTCAATTCGGTTTCAACTACATCTTGATGGTGGGTCTGGGTTGATTCGGTTGAAGGGCTTCACTCTGATGCAAACAGA CTGAGAAATCCCTAAATAACCCTAAAAATGAGAGAAAATGCCAAAATCAATTTGCAACTTTATTTTGCTCATGCGGCCACAAACATTATCGTGGCCACCA TTTGTCATGATATTGGCTATGATGTACACTATGGAAATTCTGCAGCAGCCTGGTGTTGCAAAGTGTCATGAGGATGCTAGTTCTACCATTGTGCTAGATT AAGTGATTAACTACTATGATCCTTAGTATTCATTTTTTTCATTTTACTCCTACTTTTCCAATTATATAAAATTACCTTCAGTGGTAAACTGACTATTTGG GATTAGAATGCCTGAAATGGTTTCAAGTTCAACTTTCCTTTATTCTGGTTAGTTCTGGATGCTTTTAGTCTATTTGCAATTGAAGTAAATTTACTTGTCA GAGTTAAAATGACAAGGTTTTTCTTCTAGTTTAAATTTCTTTTACTTCAATAGGAAGTTAGGAACTTGATTTTTTGAATAGGTTTGACTTTTTCTTCAAT TTTTTATGCATGTACAATTATAGTAAAGCTCTTATTCCTCCAAGAATTAAAGAAATTTCTCTGTGGGCAGCAAATCCATGCACTGGTTATGTCACTGAGT TATACTGGAATTGAAATCAAGACTGCACAGTCTCTGGAGTCATGGAGTGGTGGTGTTCTTGTGATGGTCTCTGGATCCGTCCAAATTAAGGAGTACAATA GAAGGAGGAAGTTCATGCAAACATTCTTCCTTGCACCCCAAGAGAAAGGCTTTTTTGTGCTCAATGATATTTTTCACTTTGTTGAGGAGGATCCAGTTAA CCATCATCAAGCGGTCTTGTTACCTCAGAGCAATGTTGATCCGAAAATGAATGCTCCAAGCACAGTTATTCAGCCAGTGTCCAATTACCTGCTGGGTGAA GATATTCAGGCTAGGGAGTTTGTTGCTACTAATGAGGTAAAAGAAAATGGTGTAGTTGACAATTACGGATTTTCAGAGCACCAAGTCCCTGATCCTGTGC CTGTTAGGGAGGACAATGCTGTCGAAGAGTCAAATGGTTCACTTCAATCTACAGTGAATCCAGTGCAAGACCATGTACCTGCTTCTGCTGAAGAACCTTC TGGAGAGCCCCAAAAGCACACTTATGCCTCCATCTTGCGGGTTGCTAAAGGACAATCTACACCTTCCACAGCTTCTCAGCCTTCTCAAAAGAATGCGTCC TCTTCGGAGTGGGATAGTGCTAAACATAGTCAGCAAACAACTGTGTCCGCAAATGCATTGGAAAGGTCTGAAACTGATGCTGTGGAGGAGATTCCTGCAG AAGAATATGAAGGTGAAATCAAATCTGTTTATGTCAGAAACCTGTCACCTATGGTGTCTGCTTTTGAGATTGAAGAGGAGTTCCAGAAATTTGGTAGAAT CAAGCCTGATGGTGTTGTCATAAGAAGTCGGAAGGATGTTGGCGTTTGTTACGCATTTGTTGAATTTGAAGATATGACCGGTGTCCATAATGCAGTCAAG GCAGGATCTGTTGAGATAGCAGGAAATCAAGCATATATTGAAGAGAGAAGACCGAATAGTAACATCCCTTCGCGAGGCGGAAGGCGGGGTAGAGGCAGGG GTGGCTATCAATCAGAGGCACCAAGAGGGCGTTTTGGTTCTCGGAGCTTTGGCCGGAGAAGCGACCAAGACGCACGAGAGTACAACAAACCGAGAGGAAA TGGCTTCTACCGGCCCAGTTCCCGTCAAGAGAGGGGATATTCAGGCCATCAAGTAGCAGGAAAGGGGCAGAAGCAAGCTGAGTCATATGAGTAAACATAA AATTTTAGCTACATAATCAAATTTTGGGTCCAGATATTTCAGATAGTCAATTTCAATAGATTAAATCATATATTTATATTTTTTGAAGTCTTAAATTAAA ATTTTCAAGGAATATGGATGATATTTCGTTTCTGATAAATTTGTTTATAGGGACATCTTGTTTTGTTTGTTTTCTTCCGGAATTTTATCTGAGAAATATG TTTAAAAACATCTCACAATTGAAATCTGAGATTTAGTTTTGTTATTAAAATTTTGCAGATTAACTCTACATTATTTACTAGTTTAGTCCATTATTGTAAT TATTAAACGAATTAGTATGAGCTTGGAAAACTTGTATCAAGTTAATTCTTATGAACAAAAATGAGGTAGAATACTAT
• Tissue: pods
• Gene name: LI_gene_175903;
• Additional information: details;

Expression of Ll_transcript_497866

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497866

• Blastp: Putative G3BP-like protein from Schizosaccharomyces with 49.18% of identity
• Blastx: -
• Eggnog: -
• Kegg: Link to kegg annotations (SPBP8B7.11)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432569.1)
• Pfam: Nuclear transport factor 2 (NTF2) domain (PF02136.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;