| Id Trinity | TRINITY_DN50265_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_497870 |
| Sequence | CCTAGATCACAATGACCTTCTTTGTTTTGGATGGAAATGATGCAAAAATAGCGATGGACCGAAATGAGTGTTTATTAGAAAATAATGTCTAAGAAATACG AAAAGAAGAAACTCAACAACTCGTGGAGAAGAAAAGAACCAAATCCCCTCTCAAACCCTTTCCCTTTCTCATTTCTCTTTTCGATCTCACTCATAATCTA TCTTATACCCACACCACCATTTTAATATACTCAACTTTCAATTAAATTAGGGTTTCACGTTTTTCCGCTTTCCAATGGCTACACCCTATCCTATTCCCGT TACTTCAGCTCAGGTAGGGACTTATTTCGTGGGTCAGTATTACCATGTTCTTCAGACCCAACCCGAGTTTGTTCACCAGTTCTACTCCGATGCCAGTACC ATGCTCCGTATCGATGGTCACACTAGGGAAACCGCCGCCGCAATGCTTCAAATCCATGCAATGGTTATGTCACTGAGTTATACTGGGATTGAAATAATGA CAGCGCAGTCTATGGAGTCATGGAGTGGTGGTGTTCTTGTGATGGTCTCTGGATCCGTCCAAATTAAGGAGTACAATAGAAGGAGGAAGTTCATGCAAAC ATTCTTCCTTGCACCCCAAGAGAAAGGCTTTTTTGTGCTCAATGATATTTTTCACTTTGTTGAGGAGGATCCAGTTAACCATCATCAAGCGGTCTTGTTA CCTCAGAGCAATGTTGATCCGAAAATGAATGCTCCAAGCACAGTTATTCAGCCAGTGTCCAATTACCTGCTGGGTGAAGATATTCAGGCTAGGGAGTTTG TTGCTACTAATGAGGTAAAAGAAAATGGTGTAGTTGACAATTACGGATTTTCAGAGCACCAAGTCCCTGATCCTGTGCCTGTTAGGGAGGACAATGCTGT CGAAGAGTCAAATGGTTCACTTCAATCTACAGTGAATCCAGTGCAAGACCATGTACCTGCTTCTGCTGAAGAACCTTCTGGAGAGCCCCAAAAGCACACT TATGCCTCCATCTTGCGGGTTGCTAAAGGACAATCTACACCTTCCACAGCTTCTCAGCCTTCTCAAAAGAATGCGTCCTCTTCGGAGTGGGATAGTGCTA AACATAGTCAGCAAACAACTGTGTCCGCAAATGCATTGGAAAGGTCTGAAACTGATGCTGTGGAGGAGATTCCTGCAGAAGAATATGAAGGTGAAATCAA ATCTGTTTATGTCAGAAACCTGTCACCTATGGTGTCTGCTTTTGAGATTGAAGAGGAGTTCCAGAAATTTGGTAGAATCAAGCCTGATGGTGTTGTCATA AGAAGTCGGAAGGATGTTGGCGTTTGTTACGCATTTGTTGAATTTGAAGATATGACCGGTGTCCATAATGCAGTCAAGGCAGGATCTGTTGAGATAGCAG GAAATCAAGCATATATTGAAGAGAGAAGACCGAATAGTAACATCCCTTCGCGAGGCGGAAGGCGGGGTAGAGGCAGGGGTGGCTATCAATCAGAGGCACC AAGAGGGCGTTTTGGTTCTCGGAGCTTTGGCCGGAGAAGCGACCAAGACGCACGAGAGTACAACAAACCGAGAGGAAATGGCTTCTACCGGCCCAGTTCC CGTCAAGAGAGGGGATATTCAGGCCATCAAGTAGCAGGAAAGGGGCAGAAGCAAGCTGAGTCATATGAGTAAACATAAAATTTTAGCTACATAATCAAAT TTTGGGTCCAGATATTTCAGATAGTCAATTTCAATAGATTAAATCATATATTTATATTTTTTGAAGTCTTAAATTAAAATTTTCAAGGAATATGGATGAT ATTTCGTTTCTGATAAATTTGTTTATAGGGACATCTTGTTTTGTTTGTTTTCTTCCGGAATTTTATCTGAGAAATATGTTTAAAAACATCTCACAATTGA AATCTGAGATTTAGTTTTGTTATTAAAATTTTGCAGATTAACTCTACATTATTTACTAGTTTAGTCCATTATTGTAATTATTAAACGAATTAGTATGAGC TTGGAAAACTTGTATCAAGTTAATTCTTATGAACAAAAATGAGGTAGAATACTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175903; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_497870
| Blastp | Putative G3BP-like protein from Schizosaccharomyces with 36.59% of identity |
|---|---|
| Blastx | Putative G3BP-like protein from Schizosaccharomyces with 31.97% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPBP8B7.11) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432567.1) |
| Pfam | Nuclear transport factor 2 (NTF2) domain (PF02136.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |