Ll_transcript_497947

• Id Trinity: TRINITY_DN50275_c2_g2_i14
• Name Transcript: Ll_transcript_497947
• Sequence: CATCACACCAAACACAACACAGCTACTCCGATACAAGGTGATAGAGAGAGAGAGAGAGAGAAGAAGAAGAAAGAAGAAGAAAAAGGAACTCAGATATTCC ATTCCCGAATACAACAATCACTCCACTGATCCACTCCCGATCTGCGCTGCTGCTCATTAATTCCTTTATTATCTCATTCCAAACCCTAATTACTCGATAG CCATACCATAGCCCCTTGCCTTTTCAATCATGCGCTTCCAACTACTATGAGGAACACTCTTTCCCGTAATTCTACTATTCCTACTACCACTACTCTTAAT ACTAATACTAATACTAATACTGACAATCACAATAATAATAATAATAGAACATTAAGGCTGTCCTCACCTCAACCATCTCTTAAACGATTCGGATTGTGTT CCCCTATCGTCTTCCCGGAAAGGCGAGGTGCCAAACTCAAGGCTTCTTCCACTGATGATCACGCCATAGATACATCCAAGGATTTTGAGCATAGGATTCA CATAGGAGGAAGAGGAATTCCAGCACCTGGAGATGAGAAGTCTGATTTATTAGGATATGTCGTGTTCTCTGGAAAACTTGCTTTGGATAAGAGAAAGCTT ACTACCGTCAACAACAACAAAAACAACAGTGCTGCTTCTCAACAAACCTCTTCTGATACTACCATCAACCAACAAGCTGTTGATGCCAAACTAACAAGCA AGGCTCTAGTTTGGGGATCCCATCTGCTCAACCTTGATGATGTCATCTCGGTTTCTTATAATGTGGGTCTCAGACATTTTACAGTGCACTCGTATCCATT CAAAAAGCCTTCTTGTGGTTTTTCTTGTTTTATAAAATCACAAAGAACTCGTAAGGACTTTCGCTTTGTGGCCTCTAATTTCCAAGAGGCCGTTCAATGG GTTGCTGGATTTGCAGATCAACAGTGTTTCGTCAACTGTCTTCCTCACCCTTTAGTGTCTTCCAAGAAGCAAGCATCCTCCGAATTGCTTCCTACCGATA CCCCTCCTGAGTTGCTCTTCAGATGTAAAACTCCTCCCAAGATGCTTGTCATTTTAAATCCACGATCAGGTCGAGGTCGTTCAAGTAAAGTTTTCCATGG CATTGTTGAACCAATATTTAAGCTTGCTGGGTTCAGATTAGAGGTAGTCAAAACAACATCTGCTGGTCATGCTAAAACTATTGCATCAACGGTTGACATC AGCACTTGCCCTGATGGAATTATATGTGTTGGTGGTGATGGGATAATCAATGAGGTTCTTAATGGTCTACTTAGTAGAGACAATCAAAAGGAAGGAATAT CTATACCTATTGGAATTATACCAGCTGGTTCTGATAACTCATTGGTATGGACTGTTCTTGGAGTTAGAGATCCAGTTTCTGCAGCAATGGCAATTGTAAA GGGGGGCCTTACTGCTACAGATGTTTTTGCTGTTGAATGGATTCAGACTAATAAAATTCACTTTGGATTAACAGTCTCATATTATGGTTTTGTTAGCGAT GGTAAGTCAGTGCTATGCATAAAACTCTTAAATTCAGACTTCATATTATTATTGATCGACAATCCATCTGTTATCGCTTAAAAAGGAAACTTCTTCTAGC TTTTTACCTTGTGGGATCATTTGCTTCTTCTTGAGCAACTGTGTTTTTGCCTTTCGGAGAACCTGCCGGTCTTAAGAATATGTGGCAATACTTAACTTTC AGGTTGAAATGTTTATTATCAGAGATGTCTGTTTTCTAATTAAGAGAAGAATATATATTATATAATTGAATTGAGACCTTTTTTCTTTAGGAAAATATTG GAATTTTTGGTAATTGATAGAGTGGTTATTCCATTTTATAAAAAAATAGTCACTATACGAACTTATATATGCAATACACGCCGCTTTTATGGGTTGGGGC AGAGAGTGAAGAAATCATGTGCTAGGAAGTGATGCATTAGAAGTGGATGAATCACTGTACATTTTACAATGTGTACTTGGTCGCTTAAAAACAATAAAGG TAAAGAAAACATAAAGCTAATGGAACAATGTAGAACCTTTATTTGGCAGCTAAGGATAGTTGGTAAATTCAGTCACACAATTATTAAGGTCCCCTTCTGA ATGGGTGTTAAGTTGTTATGTATTTTCTTAATGCAGTGTTGGAGCTTTCTGAAAAATATCAGAAGAGGTATGGCCCACTGCGCTATTTTGTTGCTGG
• Tissue: pods
• Gene name: LI_gene_175959;
• Additional information: details;

Expression of Ll_transcript_497947

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.5
• PS3: 0.2
• PW1: 0.2
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497947

• Blastp: Sphingoid long-chain bases kinase 1 from Arabidopsis with 67.16% of identity
• Blastx: Sphingoid long-chain bases kinase 1 from Arabidopsis with 67.34% of identity
• Eggnog: diacylglycerol kinase(COG1597)
• Kegg: Link to kegg annotations (AT5G23450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452861.1)
• Pfam: Diacylglycerol kinase catalytic domain (PF00781.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;