Ll_transcript_497935

• Id Trinity: TRINITY_DN50275_c2_g2_i7
• Name Transcript: Ll_transcript_497935
• Sequence: AGGTAATATATTAGTTAAGAAATAAGTTTAAAACACATTTGTAACTAAAATGTAGTTATTATATAAAATAAAAAAAAATAAAAAATAGTTGTAAGTTGTA ACCCACGAGGCATAAACATAAAGAGCCGGAGAATGAAATGAATGACGGCAAAGGAAGGTTGTGACTCCGTCGAGTGATCCTGATCGTCCATTTTATCACC CTCCAACACAAGGTATGTGTTCTCTTTCACCCACTCGCTTCAGATTCCATTCCTGAACACAACAATCTCACCACTGATCCAATTCCGATCTGAGCTGCTG CTGATTAATCCCGAACCCTAATTACTGGATAGTAATAATAATAATAATAATAATAATAATATTACTAGTACTAGTAGTATGAGGAAGAGTCTTTCTCGTA ATTCTACTGGTAGTACTAATAATAATAATAATAATATTAAGGTTGCATCTTCCAATGCATTAAGGCTATCCTCACCTCAACATTCTCTTAGACGATTGGG TTTCTGTTCCCAAATAGCAACCGCAGGGGAGCACGCTTCCCCTATTATCTTCCCGGAAAAGCGCGGCGCCAAATTCAAGGCTGCGAATGACCACGATATA GACACAACGAAGAATTTTGAGTATAGGATTGATGTCGGGGATGAGAAGTCGGATTTATTAGGATATGTTGTTCTCTCTGGAAAACTTGTTTTGGATAAGA GAAAGGTTACGCCCGTCGATACCAACAACAGCCAACAAACCTCTTCCGGTATTCCTAACAATCAACAAGCTGTAGATGCCAAACTAACGAGCAAGGCTTT AGTTTGGGGATCTCATCTGCTCCACCTTGACGATGTTATCTCGGTTTCTTATAATGTGGGTCTCAGACATTTTACAGTGCACTCGTACCCACTGAAAAAG CCTCCATGCACTCTTTCTTGTTTTATAAAATCACGAAGAAGTCGTAAGGACTTTCGCTTTGTGGCTTCTACTGTCGAAGAGGCAGTTCAATGGGTTGGTG GATTTGCAGATCAACAGTGTTTCGTCAACTGTCTTCCCCACCCTCTAGTGTCTTCCAAGAAGCAAGCATCCTCCGAATTGCTTCCTACCGATACCCCTCC TGAGTTGCTCTTCAGATGTAAAACTCCGCCTAAGATGCTTGTCATTTTAAACCCACGTTCAGGTCGAGGTCGTTCAATTAAAGTTTTCCATGGCATTGTC GAACCAATGTTTAAGCTTGCTGGGTTCAGATTGGAGGTAGTCAAAACGACATCTGCTGGGCATGCTAAAAATCTTGCGTCAACAGTGGACATTAGCACTT GCCCTGATGGAATTATATGTGTTGGCGGTGATGGGATAATCAATGAGGTCCTTAATGGTCTTCTTAGTAGAGAAAACCAAAAGGAAGGAATATCTATACC TATTGGAATTATACCAGCTGGTTCTGATAACTCATTGGTATGGACTGTTCTTGGAGTTAGAGATCCAGTTTCTGCAGCAATGGCAATTGTAAAGGGGGGC CTTACTGCTACAGATGTTTTTGCTGTTGAATGGATTCAGACTAATAAAATTCACTTTGGATTAACAGTCTCATATTATGGTTTTGTTAGCGATG
• Tissue: pods
• Gene name: LI_gene_175959;
• Additional information: details;

Expression of Ll_transcript_497935

FPKM

• PAB: 0
• PNAB: 1.6
• PS1: 1.7
• PS2: 0.5
• PS3: 1.3
• PW1: 0.6
• PW2: 0.2
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_497935

• Blastp: Sphingoid long-chain bases kinase 1 from Arabidopsis with 70.05% of identity
• Blastx: Sphingoid long-chain bases kinase 1 from Arabidopsis with 70.56% of identity
• Eggnog: diacylglycerol kinase(COG1597)
• Kegg: Link to kegg annotations (AT5G23450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452866.1)
• Pfam: Diacylglycerol kinase catalytic domain (PF00781.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;