Id Trinity | TRINITY_DN50275_c2_g3_i1 |
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Name Transcript | Ll_transcript_497918 |
Sequence | GCCACTCTTGTTCACTTCGCATTCTCATTTCTTTCTGTTTCTACATCTTGTGAGTGATGAGAACTAAGACTCCTGGCGGGCGTAGAAAGCGTGCGGTCTC TCCAACGATTCCTTCCCTCCCCACCATTCCTCTCCTCTCCACCACCCAGGATGAGTACAATGGAACTATGTTTGAGACATCATCTGAGAGTGATCACAAA CAACAAGACGATTCTGTCGATTTTTGGACAAGTATATGTGCATTTGTTGTAATCAAGGTGTGGGAGGGTTGGTTTGTAGTCAAACTGGTTGTCCTGTTAC TCTCCATGCAAACTGTTTCGACTCGGAACCTAAATTCGACGATTTCGGTAACTTCTACTGCCCCTATTGCTGGTACAAGCGGGCTGTGGACGAGTGTCAA GAGTTGAGGGAAAAAGCTATGACAGCGAAGAAAGCTTTGTCAAGCTTTTTGGATAGAAATGTTTTCACGAGTGATGAAATGGCGCAGACCGATCGGGATT CTATGAGGAAAGAGGCTGTTGTGGGAGATGGTGATAATGGGTATGATGGTAATGATGATGTTCACAATCAGAATTTACAGGCTGAGCTAAATCAACAAAG AAAATTGCATAATTCAGATATCGAACACACCGATGCTAATGATGATGTTGGACATTGTAGAGAAGAAGAAATACCTGTACATATTAAGGTGGTTCAGGAT TCAATTAACTTGGAGAAATTTGACAAACCCGACACTTCTGAAACACATGAAACCAGAAATACGGAACCGAAAGAAACCAAGGATTCAAGACATAATATGG AGGACGGATGTGAAAGAGTTGTTGAGGTTGGAGAGGAAGTAGAACCTTTGAGTGCTTCCCGTGTGGGAATGTATGCTGGTGTACAATCACAAAATATTGC ATGTGATACGGGGGCTGAAGAAAGTATTGCAAATCCGGCGGAGAATAAGGGAAGGATTAAAGATAAAGGAAAGCTGCCACAGGTAGAACAAAAGGTGTCT TCAACTGGTAGTTCTATGAGTGAAACTAATGATTCGGAGTTTGAGGCCGTCTCACTGAAGAAGGGCCGTGTCAAGCGGAAGGTTCAAGAGACAGCATATC CTCAGAAGGTTGCTCCTGCCAAGAAATCATTATTGCAGGAGCATAACACTGCAGCCAAAATTGAGAGTGACATAAACGAGGAAGTGACCAGCTCCAGAAC TTTAAGACAACAAAAGTCACCTAACTATGTTTGCAGCAGGAATCAGTCTTTTCTGGCTGGAAGGCGTAAGAAATTACGTTGGACAGTTGAAGAAGAAACA GCTCTGAAGGAAGGAGTTTTAAAGTTCTCAACAGAAAATGAGAAAATCCCCTGGAGGAAAATTTTAGAATTTGGTACTCGTGTATTTGATAAGTCTCGTA ATCCTGTTGATCTGAAGGATAAATGGAGGAACATTACTGCCAAGGAAGGTAGTCAATAGCATGTTATAGCGCCGCTATAGCAGATAGCCGTGCAGATAGC CAGTAGTGCCTGTAGCAGGTCAAATAGCAGGAGAATCATGGGTCGTGACCTCCGATATGTTTTGTTGCGAGTGGAACCCTAATTTTAGGGAGGACAAGTC TTTTTTGCCCCTCTTTTTTAATAGCTGACAGGTTTTACCACTAGGGTTTTAGGTAATTTAACTTCCCCTTTTCCCTTCTACTTAACAAGTTGATTTTCCT AGGCCATGTGATTTTTACTCGGTTCTACTTCTACCTTTCGTCTTTCTTCTCGCTTCCTAATTCCAATGTATATGTTTGGTTGCTTACATGTTCTTCATCA ACATAGGACAAAATTGGAAGGCTTCCTAATTCACTAACATACTCTGCCTTTTCTCGGCAGGATTTTTTCCCTCGCCACTAATTGTTTGTCGCATCATCTC TTTATTGATTCTCTTATCAAATTGATTGAACCCAATTTTTCATCATCTTTATGTGGTTCAATTTCATGAGATACAACTCTATAAGTCTATTACGACCTCC AACTTCCATCAGCTCTAGAATCTTTAATACTACTATCTTGACTATTAATGAGGAATGTGTCTTTGATATGATCTGTTTTAGTATTTATATATGTAGACTA TAAATTACTTAAATATGTTTTTTCTTAGTTGTAGCGGTTATCCTGCAACCCGCTATCCCGCTATAGTGTTTTTGAGGTCGGCCGCTATGTTCCGCTATCC GCAATTGAC BLAST |
Tissue | pods |
Gene name | LI_gene_175960; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_497918
Blastp | Telomere repeat-binding factor 3 from Arabidopsis with 56.72% of identity |
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Blastx | Telomere repeat-binding factor 3 from Arabidopsis with 56.72% of identity |
Eggnog | H15(ENOG41105F7) |
Kegg | Link to kegg annotations (AT3G49850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413730.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |