| Id Trinity | TRINITY_DN50276_c0_g2_i15 |
|---|---|
| Name Transcript | Ll_transcript_497667 |
| Sequence | CTTTGTGACTTTGAAGGGTAAGTTTAAATTCTAGAAACAATTTGCTTATGAGTGTAAACCGGCTATATCTACTATTCTCAAATACTACTGGCGGCTCGAG TCTCACACACATAAACTTCCCTTCATAAAAAGTTAATTAGTTGACCAAGTTAAAGCAAACAGAATCTTGCTCTACACATATATTATATATAGTTAGTTAG TGTAAATACTCGTATTTACCATACTTATATGATATAAATTACAGTATGATTTCAGCGGGAGAAATGACTTGGTGAGATTCATAAAGGAAATAGAAGCACA AGGACTGTATGTTTGCCTCAGGATTGGACCTTTCATCGAAAGTGAATGGACTTACGGGGGGTTTCCCTTTTGGTTACATGATGTTCCTGGCATTGTATAC CGAACAGACAATGAACCATTCAAGTTCTACATGCAAAATTTTACGACAAAAATAGTGGACATGATGAAAGCAGAAAACTTATATGCTTCACAAGGAGGCC CAATTATATTATCTCAGATTGAGAATGAATATCAAAACATCCAAAAGGCATTTGGTGGAGCAGGATCAGATTATGTGAAATGGGCTGCAAAAATGGCTGT GGGCCTTCAAACTGGGGTACCCTGGGTTATGTGCAAGGAAACTGATGCTCCTGATCCTGTGATCAATACATGCAATGGCATGAAATGTGGAGAAACTTTT ACAGGGCCAAACTCTCCCAATAAGCCCACCATGTGGACAGAGAACTGGACATCTTTCTATCAAGTTTATGGTGGAATACCATACATAAGGTCTGCTCAGG ACATTGCATTTCATGTCACTCTTTTTATTGCACGAAATGGAAGCTATGTCAACTATTATATGTACCATGGTGGAACTAATTTTGGGAGAACAGCCTCTGC TTATGTTATAACAGGCTATTATGATCAAGCTCCACTTGATGAATATGGTTTGTTCAGACAACCCAAGTGGGGTCATCTTAAGGAGCTGCATGCTGCAATC AAGTCTTGTTCGACCACTTTATTGCAAGGAGTGCCAAGGAATTTCTCATTAGGCCAATTGCAAGAGGGTTATGTTTTTGAAGAAGAAAATGGAGGATGTG TTGCATTCCTTATAAACAATGATGTAGTGAATAATGTAACTGTCCAATTCCATAACAGATCATATGAATTGCTCCCAAAGTCAATAAGTGTCTTACCAGA TTGTCAAAATGTGACTTTTAATACTGCAAATGTAAATACAACAAGCAACAGAAGAATCTACATTCCTAGACAAAACTTTAGCTCAGTGAATGATTGGGAG CAATTTGAAGATGTTATTCCCAACTTTGATGACACTTCCCTAAGATCAAACTCATTACTTGAACATATGAATACAACTAAAGACAAATCAGATTATCTTT GGTATACTGTTAGGTTAGTCATCTCGTATTTTTGATATTATCAAAGGTATCCCTCAACTTTTAAGTAAGGAACTAATCTTAAGAATCTAACGGGACATTT TAGTCATCTGGTTTACTAACAAAAAATGTCAAATATATGTCATTCTAAGCTATGTGTTTTTTTTGTATTACCAAGTGTATCCCCTCACCTTTTGGGGTAA GGAGTTAATCCCTTTCGGGGTTTGTGATTACCCATCCCAACAAGTGTTGCTCCCAATAATCGAACTCTCCATCTTATGGATCCAGTGGGGCTTTACACCA CTATGCCAACATTTTGTTGTTGGTTAGTTATCTCTTTTATTTGTGATGTCATAAAGTTTGTTCGAACTAATGAATAAACTAATTAATTTTGTGAACAGGT TTGAATATAATTTATCTTGCAATGAACCAACACTTCGAGTTCAATCTGCTGCTCACGTTGCTCATGCTTTTGTGAATGACACATACACAGGAGCTGTGCA TGGAAACCATGATGTGAAGTCATTCACCTTAGAGCTTCCAGTTACAATAAATCAAGGAACAAATAACCTTTCTATACTCAGTGTTATGGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175966; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_497667
| Blastp | Beta-galactosidase 6 from Arabidopsis with 67.79% of identity |
|---|---|
| Blastx | Beta-galactosidase 6 from Arabidopsis with 70.69% of identity |
| Eggnog | beta-galactosidase(COG1874) |
| Kegg | Link to kegg annotations (AT5G63800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417219.1) |
| Pfam | Glycosyl hydrolases family 35 (PF01301.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |