Id Trinity | TRINITY_DN50276_c0_g2_i18 |
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Name Transcript | Ll_transcript_497672 |
Sequence | CTTTGTGACTTTGAAGGGTAAGTTTAAATTCTAGAAACAATTTGCTTATGAGTGTAAACCGGCTATATCTACTATTCTCAAATACTACTGGCGGCTCGAG TCTCACACACATAAACTTCCCTTCATAAAAAGTTAATTAGTTGACCAAGTTAAAGCAAACAGAATCTTGCTCTACACATATATTATATATAGTTAGTTAG TGTAAATACTCGTATTTACCATACTTATATGATATAAATTACAGTATGATTTCAGCGGGAGAAATGACTTGGTGAGATTCATAAAGGAAATAGAAGCACA AGGACTGTATGTTTGCCTCAGGATTGGACCTTTCATCGAAAGTGAATGGACTTACGGGGGGTTTCCCTTTTGGTTACATGATGTTCCTGGCATTGTATAC CGAACAGACAATGAACCATTCAAGTTCTACATGCAAAATTTTACGACAAAAATAGTGGACATGATGAAAGCAGAAAACTTATATGCTTCACAAGGAGGCC CAATTATATTATCTCAGATTGAGAATGAATATCAAAACATCCAAAAGGCATTTGGTGGAGCAGGATCAGATTATGTGAAATGGGCTGCAAAAATGGCTGT GGGCCTTCAAACTGGGGTACCCTGGGTTATGTGCAAGGAAACTGATGCTCCTGATCCTGTGGTCAGTTTCACTAACACTAACTCTCTTGCTTTAAAATTT TAATATTTTTATAATTCCTTAAACTATTTATTTATTTTAACACTAACCCTAGTATTTATATGACCCTCAAAGACATGGGACTAAGTATCATTAATAAGTA TCCTTTTGAGTTTTTCTATTCATGAAGATCAATACATGCAATGGCATGAAATGTGGAGAAACTTTTACAGGGCCAAACTCTCCCAATAAGCCCACCATGT GGACAGAGAACTGGACATCTTTCTATCAAGTTTATGGTGGAATACCATACATAAGGTCTGCTCAGGACATTGCATTTCATGTCACTCTTTTTATTGCACG AAATGGAAGCTATGTCAACTATTATATGTACCATGGTGGAACTAATTTTGGGAGAACAGCCTCTGCTTATGTTATAACAGGCTATTATGATCAAGCTCCA CTTGATGAATATGGTTTGTTCAGACAACCCAAGTGGGGTCATCTTAAGGAGCTGCATGCTGCAATCAAGTCTTGTTCGACCACTTTATTGCAAGGAGTGC CAAGGAATTTCTCATTAGGCCAATTGCAAGAGGGTTATGTTTTTGAAGAAGAAAATGGAGGATGTGTTGCATTCCTTATAAACAATGATGTAGTGAATAA TGTAACTGTCCAATTCCATAACAGATCATATGAATTGCTCCCAAAGTCAATAAGTGTCTTACCAGATTGTCAAAATGTGACTTTTAATACTGCAAATGTA AATACAACAAGCAACAGAAGAATCTACATTCCTAGACAAAACTTTAGCTCAGTGAATGATTGGGAGCAATTTGAAGATGTTATTCCCAACTTTGATGACA CTTCCCTAAGATCAAACTCATTACTTGAACATATGAATACAACTAAAGACAAATCAGATTATCTTTGGTATACTGTTAGGTTAGTCATCTCGTATTTTTG ATATTATCAAAGGTATCCCTCAACTTTTAAGTAAGGAACTAATCTTAAGAATCTAACGGGACATTTTAGTCATCTGGTTTACTAACAAAAAATGTCAAAT ATATGTCATTCTAAGCTATGTGTTTTTTTTGTATTACCAAGTGTATCCCCTCACCTTTTGGGGTAAGGAGTTAATCCCTTTCGGGGTTTGTGATTACCCA TCCCAACAAGTGTTGCTCCCAATAATCGAACTCTCCATCTTATGGATCCAGTGGGGCTTTACACCACTATGCCAACATTTTGTTGTTGGTTTGAATATAA TTTATCTTGCAATGAACCAACACTTCGAGTTCAATCTGCTGCTCACGTTGCTCATGCTTTTGTGAATGACACATACACAGGAGCTGTGCATGGAAACCAT GATGTGAAGTCATTCACCTTAGAGCTTCCAGTTACAATAAATCAAGGAACAAATAACCTTTCTATACTCAGTGTTATGGTTGGATTACCAGATTCAGGGG CATTTCTTGAAAGAAGATTTGCTGGTTTAACTATAGTGGAACTTCAATGCAGTGAAGAAGAGTCTCTTAATTTGAGCAATTCTACATGGGGGTATCAGGT TTAATTTTGTCTTCTACATTGTTTTGTTTTTAAGCCTTAATTTACCAATTTACATTGTTGCCTATTATTGATGCTATACAATATTCAAAAATGAAATTTG CACAATTATATTAGATGCACGGATACCTTTGATTTTATGAGGCATAACATGGATGCTTTGTCTTATAGAGTCTAAAGTTGTCATATCTGATTATACATAT AATTACGGATAGGATATTAATTTCATACAATAAACAACTAATCTCAACCTTATTATAGGTGGGATTACTGGGAGAACAATTAGAGGTATATAAAAATAGC AGTGATATTGAATGGAGTGAACTTGGGAATATTATCAATGAGACACACATATGGTACAAGACTAGTTTTGACACACCTGAGGGAGATGACCCTGTTGCCT TGGATCTTAGTTCGATGGGAAAAGGTGAAGCTTGGGTGAATGGACAAAGCATTGGTCGCTATTGGATCTTGTTCCATGATTCCAAAGGAAACCCTTCTCA ATCACTGTACCATGTGCCACGGTCTTTCCTTAATGACAATGGGAACATTTTGGTTTTGATGGAGGAAGGTGGAGGGAATCCTCTACATATCTCCTTGGAC ACTGTTTCAATCACAGATTTCCAAGATGAAAACTTCACTAAATTATCACTCCCATCCTTTTCTTAGTATTAGAAGTAATATACGCACAAAATATGTTTCC TTTCTGGGATGGGAAATGGGGAAATTGTCTTGGTTTGTGTACATGACTATTAAATTCATTATAAAAAAATAAAAATCTTGAATCTGGGTTGATTCTTTGT CATATAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_175966; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_497672
Blastp | Beta-galactosidase 6 from Arabidopsis with 66.27% of identity |
---|---|
Blastx | Beta-galactosidase 6 from Arabidopsis with 66.27% of identity |
Eggnog | beta-galactosidase(COG1874) |
Kegg | Link to kegg annotations (AT5G63800) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417221.1) |
Pfam | Glycosyl hydrolases family 35 (PF01301.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |