Ll_transcript_498993

• Id Trinity: TRINITY_DN50282_c0_g1_i18
• Name Transcript: Ll_transcript_498993
• Sequence: ATATACTAAGTATCTGATCTGATCTAGCTGTAAAGTTAGAGACACTGAGTCACGCAACATCATATGACCCACAAACAGACCCTACTTCTGAACCATCACT CTCTCACTTCACCAAAACAACTTCAGAATTCAGATCATCTCCCACACTATTCAAACTAAACACACATTCATTATCTTCTACACTCTCACAACTTTTGTTT TTCAACCAAAAGATCTCTGCTTTCTTTTGAAATGGAGAGTTCTGAGAAGGTGGTTGCTGTGATTATGGTGGGTGGACCCACTAAAGGGACCAGATTTCGA CCTCTTTCATTCAATACTCCAAAGCCTCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCATCATCCTATTTCTGCTTGTAAAAAGATACCCAATTTGGCTC AAATTTATCTGGTTGGATTCTACGAGGAGCGAGAATTCGCACTATATGTCTCTTCAATTTCATATGAGCTGAAATTGCCAGTAAGATATTTGAAGGAGGA TAAACCACATGGTTCAGCCGGTGGCCTTTACTACTTCAGAGATATTATCATGGAAGACAATCCCTCACATATCTTTCTGCTAAATTGTGATGTTTGCTGC AGTTTTCCACTTTCATCGATGCTTGAAGCGCATAGAAGATATGGCGGGATGGGGACAATGTTGGTAATCAAGGTTTCTGCAGAATCTGCCAATGAGTTCG GCGAGTTGGTTGCTGATCCAACCACCAACGAATTGCTGCATTATACTGAGAAACCTGAGACTTTCATGAGTATTCAACTTGGTTCATTTATCTTCACTTT TTCTCAAGAAAAAGAAAATTGGTGTAACATATGTCTATCTTGCTTCTGATTTTACCTAGAGAATATTAACCATCTTATAATATGCAGGTTAGCAATTTGA TAAATTGTGGTGTCTACATTTTCACGCCGGAGATTTTTAATGCCATCGAAGATGTATCTATGAACCGAGAAGGCAGAGCTAATCTACGTCGTGTCTCCAG CTTTGAAGCACTCCAATCTGCCACAAGGACTCTCCCGTCTGATTTTGTAAGACTGGATCAAGATATATTATCTCCTCTAGCTGGAAAAAAGCAACTGTAT ACATATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCAGGAATGTCTTTGAAATGCTCGGAGTTGTATCTTGCGCAATTCCGGTATACCTCATCCC ATCTTTTGGCTAGCGGAGATGGTAAAAGGAATCCTACAGTTGTTGGTGATGTATATATTCACCCCTCTGCAAAAGTTCATCCATCTGCAAAGATTGGTCC CAATGTTTCTATCTCGGCTAATGTTCGCGTAGGTCCTGGTGTCAGGTTGATCCATTGTATCATCCTGGATGATGTTGAAATCAAGGAAAATGCTTTAGTT ATAAACTCTATTGTCGGATGGAAGTCATCGATCGGAAGATGGTCAAGGGTGCAGGCTGATGGTGACTACAATGCAAAGCTTGGCACAACCATCCTAGGAG AAGATGTGATAGTTGAAGATGAGGTGGTGGTGATCAACAGCATAGTTCTCCCTCATAAGACTCTCAATGTGAGTGTACAAGAAGAAATCATCTTATAATA TTGAAAACAAAGCTTTACTAGTAACCCATCAAAACAAGAGCCTTCAAGTGTTGCTATAATGGTTTTTTCAGGAAAAAGGAACTACTCACTCTAAATATAT TATATATGAATTGCCTGCAATTTTTGTCTTACATATGCAATTTTCAATACATTTTTCTCTATCCTTCCAATTTTATTTTATGTCCAAGAGGGACCAATAA AATCATTATTAAACTATATATCAAAGTTCTGACTAGGAATCTTATATTAGTGTTTTTATGTTCTCTTTCAATTAAGCTTATTTTTCTATGATGAATGATA AAGAGTT
• Tissue: pods
• Gene name: LI_gene_176018;
• Additional information: details;

Expression of Ll_transcript_498993

FPKM

• PAB: 3.2
• PNAB: 3.5
• PS1: 1.8
• PS2: 0.8
• PS3: 0.4
• PW1: 1.4
• PW2: 2.1
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_498993

• Blastp: Mannose-1-phosphate guanyltransferase alpha-B from Danio with 42.75% of identity
• Blastx: Mannose-1-phosphate guanyltransferase alpha from Dictyostelium with 49.18% of identity
• Eggnog: nucleotidyl transferase(COG1208)
• Kegg: Link to kegg annotations (393469)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452921.1)
• Pfam: Bacterial transferase hexapeptide (six repeats) (PF00132.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;