Id Trinity | TRINITY_DN50284_c0_g1_i5 |
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Name Transcript | Ll_transcript_496891 |
Sequence | TGTTATTAATGTTCTCTCAATTGTGTCGGGATCATAAGTATGAATACACAACTTTGAGTATCTATTCTTGTTGAAACTTATCTCTTTTCATTTAATTCTT TATTCTAAGTTTGGCACATGTATTAGTATACTACATTAGTTTTGTTTATTTATTATTGTTTATAATTTAACCCCAGAAGAAGAAAAACATTATCTCATAT CTCTCAATTGTCCTGAAACACACTACATATTACACATGCTGCATTGCATAGCCTTGTCTGGTTCTCTTACCTTAGCTTTTGTGAAGCTTGGCACAAATCT ATAGGGACATTATTTTCCCATAGAAACTGAGATAAAGTGAGCTCATTAGAGAGTTTTAGGTGAAGACAATGAAGGAACACGACAATGTCACCGACAACCT TATTTCCTTATTAACATATTCATACAGCTGTCGTGTCCTTCTCTTTCTATAACACATATTTCATTCCTTACCTCTTCTCTTCACTCTTCTTTCGTTATCT GTTCACAAAGCAACATTTTTTCATTTACACTAATACACGCATGTGACTCATAAAGCAAAACAAAGCAAGGTTGTTTTGTTTTTGTGTTAACTAAGCAACC CCATTTCATTACTATTTGGTTAGAGGAAAGTGTCTTGGGAACAAAAAAGAAATGGGCATGAGAGGGACACAGATTCTGTTCTTTGTGTTTTGGTTCCTTG GCACTTATGCTCCTACTTTGTTTTGTGCTAATGTGCAATATGATCATAGAGCATTGGTGATTGATGGTAAGCGCAGGGTCTTGATATCTGGTTCTATTCA TTACCCTCGTAGTACTCCTGAGATGTGGCCAGACCTTATTCAGAAATCTAAGGATGGAGGATTGGATGTCATTGAAACCTACGTTTTCTGGAACTTACAT GAACCAGTTAGAGGCCAGTACAATTTTGAGGGGAGGAATGATTTGGTGAAATTTGTGAAGACGGTAGCTGCAGCAGGTCTATATGTGCATCTCAGGGTTG GTCCATATGCCTGTGCTGAATGGAACTATGGTGGTTTCCCTCTTTGGCTTCACTTTATTCCGGGAATTCAGTTCAGAACTGACAATGAACCATTCAAGGC AGAAATGCAGAGATTCACAGCTAAGATTGTGGATTTGATGAAGCAAGAGAGTCTCTATGCCTCACAAGGAGGACCTATAATTTTATCTCAGATTGAAAAC GAGTATGGAAACATTGAAGTACACTACGGTGCTGCCGGTAAATCCTACGTCAAGTGGGCAGCAACAATGGCTACATCTCTTGATACAGGGGTTCCCTGGG TCATGTGCCAGCAAGCAGATGCTCCTGATTCAGTTATTAATACATGCAATGGGTTTTACTGTGATCAGTTCACACCAAACTCTAATGCAACACCAAAAAT GTGGACTGAGAATTGGACTGGATGGTTTCTTTCATTCGGTGGTTCTGTTCCATTTAGACCTGTGGAAGATCTTGCATTTTCCGTGGCACGTTTTTTCCAA CGAGGTGGAACATTTCAAAATTACTATATGTACCATGGAGGGACCAACTTTGGCCGAACTTCTGGGGGACCTTTCATTGCTACTAGTTACGATTATGATG CCCCAATAGATGAGTATGGGTTTATTAGACAGCCTAAGTGGGGCCACCTTAAAGATGTTCATAAGGCCATTAAGCTTTGTGAAGAAGCATTAATAGCTAC TGATCCAACAATTACATCTCCTGGTCCGAATCTAGAGATTGCAGTTTATAAGACGGAAGCAGTATGTGCTGCCTTCCTTGCCAATGTGGACACGGCGTCT GATGCAACAGTAAATTTCAACGGCAATTCTTACCACTTGCCTGCATGGTCTGTAAGCATCTTACCAGATTGCAAAAATGTAGCCCTTAACACTGCAAAGA TTAATTCTGCATCTACGATTTCGAGCTTCACAACTGAATCCTTAAAAGAAGACATTGGTTCTTTAGAAGCTTCTACTTCAGGATGGAGCTGGATAAGTGA ACCAGTAGGTATTTCAAAGGCTGATTCATTTTCAAGAGTTGGATTACTTGAGCAAATAAACACAACAGCTGACATAAGTGACTACTTATGGTACTCAATA AGGTATATTGGCCTCCAAAGTTGAAATGTTTTTCCTCCGACTTATAATTCTCTGCTCGTTGATAACATTTTTCTTGTTTTTTTCACCAAAGTATTGAAAA TGATGATACCGGTGCCCAAACTGTCCTTCACATCGAGTCACTTGGTCATGCACTTCATGCTTTCATCAACGGGAAGCTTGCAGGTAAATTTAAATTTGAA GATAACTTTCCTGCAATATCAGAAGAAGCAGTTGGAAATATGCGACTAAACGCCAGGTTCATTAAATATGTAAGAGGGGAAACATTGAGTTTTAGCATGA TCCGGATTTAGGGTATATCTTGAAATGCAAGACCTTCGGTCGCTAGATGTAAGGAATATATAGTCAAGGTTGATTTGAAATCAAATAAGAAAGTAAGAAC AATTGTTCATGGATTCCTTGCTAGAGTGTTCCGAGAATTGTTTCTTTCAATTAACTTTTTACTCGAGTTACTTAATAATAAGTATATCTGATATTATTAA AATTTCTCAGGGAGCCATGCAGGCAACAGTGAAAAAGCTAAGCTCAATGTGGATATTCCAATCACACTTGTGGCTGGAACGAACGCAATTGATCTCCTTA GTTTAACCGTGGGACTTCAGGTTCAACCTTTTCCTATTATAATGGAGGACATTATGATTTATACTTTATATCATGCAACTATGCATTGTTTTGTTAAACT CCACCCAACATGACTTGGCTTGATCATCAGTAATTAATCTATTACTAATCAGTTAATTTGAGCCTTACATGCTTCAGAATTACGGAGAATTTTTCGACAC ATGGGGAGCAGGGATCACTGGTCCAGTGATATTGAAAGGTTTGGAGAATGGAAGCACTCTTGATCTCTCCTCCAAGAAGTGGACATATCAGGTAGTCTTA TCTTTAATTAAAACGTATTCTTGTCTTTCTCCATTTGAGGAATTTATCAACAAAACATTGGAGAGGTTCAAGGAAAATGAAGCTGCTAACTTTGTAATAT TATTCTCAACCTCTTTGGAAGTTTTGTGGTTCAAGCTTTAGCTAACAAGGCTTGGTACTCACTTGTCTCAGGCAACAGTAAAAATTACGCGAAAAGTCTA CTTGTATCACCATGGATTTTTTCTTTTCACAATATCATGTCTATGAATTTTGTAGAACAACTTAGTTTACCTTTTTGGTATAAACCACACATTCTCGATT TCTGTGATGCAGGTTGGGCTCAAAGGTGAAGAATTAGGTCCGTCTAGTGGGAGTTCTGGACAGTGGAATACAGAATCTACCTTGCCTAAGGACCAACCAC TGACTTGGTACAAGACAAATTTTGATGCTCCATCAGGAAGTAATCCAGTAGCAATTGACTTCACTGGAATGGGAAAAGGTGAGGCTTGGGTAAATGGACA AAGCATTGGAAGATACTGGCCTACATATATCTCTTCAAATGCTGGTTGCACTGACTCATGCAATTATAGAGGGCACTATAGTTCATCAAAATGTCACAAG AATTGCGGAAAACCATCACAAACACTATACCATGTGCCGCGATCATGGTTGAAACCGAATGGAAACATTCTTGTACTATTCGAAGAAAGAGGAGGTGATC CAACGCAAATATCTTTTGCTACAAAAGATATACAAAGTTTGTGTGCACATGTATCTGAAACTCATCCACCACCCTTAGACTTGTGGAATTCAGACACAGA ATCTGGAACAAAAGTAGGGCCTGTATTGTCACTCAAGTGCAGTGATCATAAGCAACTTATCTCTTCCATTAAATTTGCAAGCTATGGAACCCCTCTTGGA ACTTGTGGAAACTTCAACCATGGACATTGCAGCAGCAACAAGGCTATGTCCATTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAATGTTGGAGTAT CAACTGATACATTTGGAGATCCTTGTAAAGGAGTGAAAAAGAGTTTAGCTGTTGAAGTTACTTGTACATAGACACATTGCTTCATCCCTTTTTTCCTGCA ACTATATATTGCCTTAGGTGATATTTGGTTGAAGATGCTTTCATAGGAAGCTGGACAATGAAATCAAGGGCCCTTTAAGCCTAATTGAAGCATCCATTAT TGCAAGTTACAAACAAATATAATAAAAAAATCATTAGTGCATGTAAGATTTGAAAAATGATGGCCATGTGCAACAGTATTACTAGGCCCTTAATTGTTAT GACTAATGAAAACAATACAAAAAGCAACCAAAGTACTATCATAGTATCATGTGTTATTTGTCATGGTCAGTTATATAAGCATAGTCCTTCATTTATATCA GAACCTGTAAGGGTTGCATAATTAAAAGAGGAATTACCACTTTGATATGCATAAGCATGTGGTTGAGAAAATGTAAGATGCCATAACTTACCACAAATTT GGAGCTCTTATTATAAAC BLAST |
Tissue | pods |
Gene name | LI_gene_176034; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_496891
Blastp | Beta-galactosidase 8 from Arabidopsis with 81.09% of identity |
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Blastx | Beta-galactosidase 8 from Arabidopsis with 81.09% of identity |
Eggnog | beta-galactosidase(COG1874) |
Kegg | Link to kegg annotations (AT2G28470) |
CantataDB | Link to cantataDB annotations (CNT0001217) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458428.1) |
Pfam | Glycosyl hydrolases family 35 (PF01301.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |