Id Trinity | TRINITY_DN50288_c0_g1_i1 |
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Name Transcript | Ll_transcript_499012 |
Sequence | GAAAGATAGAAAACAATACTCTAATAATGGGGTTTAAGCTTCTCTCTCTAACATCCCTTTCTCTCTCCCCATTTCCACTTTTTACTCCACCCTTCCTTCT ATCCACAATTCCCTCTTCCCTTTCTAAATCCACACCCGGCGCAGGTTAGTCCTCACCCCTCACCATTACATATTTATTTCATTCTTTATCTCGCAATATC AAAATCGTTGTTGTTTTTGTTTGTTTTAGTAACATCCTTAACCACAACGAGATGCGTTAACAACGAAAAGGAAGAAGTTCTTCTTCCAGGAATGCCAAAG GAATACTATGATGATGAATGGCAAGCAAAACAACGAGAAAGGACGAAGGAGTTGCGTCAAAGGCAGAGAGAGGAAGATGAGGAGGAAGAGAGAAAGATTG AAGAGTATCGTGAAGTTGGTATGCGTTTGAAAGGATATCCTGAAGAAGATGTTAGAAATGCACGGAAGTTGGTTTCGAGTTTTATAAGAGCTGAAGAAGA AATTGAACAGAAAATTGAGGAAGCTGCGGAGAAAGGAATACTAACCGAACTTGTTTTAATGGTCATATGGAATCGCTTGGATCTTGCTCGACGTGATAAT GAAAAGGATGCTATAAGAAGTCTGGATCTGTTATACCGAAGGGTTGAGGTAACAACTACTCCTTTTATCAGGAGTTCCAGCATTCATTTCAGCGAGAATT TTATCCCCAACAGTCAACACATGCACAAAGAAGAGGAAAAATATTGAAAGCAATGGTTAAGAAGGATAACGAAAGGGATTGGTTCATTAAGATGGCCTTG GAGACTTGAATGCTAATACTTTGATGATTTGTCAACAAAAAAATAATAACTTGATGATGACAAACATTGATGCTTCTCTCTAGAAGCAAAAACATGCACA AATAAAAAATAACTTTATACAAAATAATCTCTTTTCAATAGCACTTTTTTGTATACCAACAAAAATTGTATATGGTGGTAAGTGAGCCACACTCCCATGG AGATGACTAAAGTTCAAATTCTGGAGAAGGCAATTATTGGGAGTGCCTCCTAGTCACTACAATGTTCAAGGGTTAGGTTCACAGCAATGTTTGTGAGAAT ATTGATTAAGACAGAAGTAGACGTAGCACTTTTTTGTAAGTTTTTAAGAGCACAACATTTTCAAAGAATATCGCAGAAAAAGCCAAACGACTATTAGAAG CCAAGTAAGGGCCCCTTGATTTTCTTAGGACCTTGGGATATTTGTTAATAAAATAACTTGTGTTTCTGTAAACAATCTTTGCTAAGTTTAGTGTGTAGGG CATATGATTTTTTGTTTGTTATTTTTTCTGAGTACACTTCTATAGTAATTTGTGGGGGATATATAGACCTTTTTCTTATCTGTCTGTTTAGTTGAATAAA CTTTCACAATCATATTGACTTCAATTTAGAACATCTATAGCATATTGCATTCTGCACAGGTTAACTGAAAGTCTGAAACTTAATATTTATTTTGTTCCTT TTTCTGGGAGTTTTATTTTCTCTTCTTGATTATAGACTGAGATCTTGAAACGGGAGGCTACCCCTGCAATGAGACTGCTCAATGATCTTTTGATTATGTA TGATGGCTTTGATTATGAAGAGTGGCTGAAGAAATGTAAAAAGCGCATGATCGATACATTTCCCCGGGAGGATCCATATAGTATTCTTGTTCCACCAGGA TTTGAGTCATTTGACATAGATAAGCTTGAAGGGCCATTGTCACCACCACCTGAACATGATGATACTCTTTTGAGGGTGGACTTTGTAAGGGAGGTGGATG AATTGCTACAAGAGGTTCGCGTTGAACAGAGTGAAGTAGAGAATGAAGCAGGGTTTGATCCCGAATCTGTTGCAAATAGATTGAAACAACAGGAGAGGCA ACAATCAATACGCCAAGTAGAAGCTCTGTTAGACTTAGCCATTGGTCTGAAATGGTAGCTACTTGGCTCATTTTTTATGGCGACAAGATTGGCTTCTGAG TCATGGAAACCCCAACTTGCATTTGATTCATATCCATTATCTCATAGTTTATACTTCATAGTTTAGAGTAGGAATGATTATGTATGGTAATTGCAATCCA ATTTCTGATAGTTGAGTTTTTCTTTTTCTCTAGGTGTGATCTGAATGTACATTTTGGGTGATCCTGTATTTTTAATTCTAGTCCAAAAAAATATCAATGA AAGTCTGAATTGTCTATTTCCTTAGCTAAGTGCAAAGTTAAAATTTCTACACATAAAATTATGGGTCAATGAATGTTTGTATTGAGCTAG BLAST |
Tissue | pods |
Gene name | LI_gene_176061; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_499012
Blastp | Protein PALE CRESS, chloroplastic from Arabidopsis with 81.67% of identity |
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Blastx | Protein PALE CRESS, chloroplastic from Arabidopsis with 63.19% of identity |
Eggnog | NA(ENOG4111FTZ) |
Kegg | Link to kegg annotations (AT2G48120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452673.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |