| Id Trinity | TRINITY_DN50288_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_499017 |
| Sequence | GAAAGATAGAAAACAATACTCTAATAATGGGGTTTAAGCTTCTCTCTCTAACATCCCTTTCTCTCTCCCCATTTCCACTTTTTACTCCACCCTTCCTTCT ATCCACAATTCCCTCTTCCCTTTCTAAATCCACACCCGGCGCAGTAACATCCTTAACCACAACGAGATGCGTTAACAACGAAAAGGAAGAAGTTCTTCTT CCAGGAATGCCAAAGGAATACTATGATGATGAATGGCAAGCAAAACAACGAGAAAGGACGAAGGAGTTGCGTCAAAGGCAGAGAGAGGAAGATGAGGAGG AAGAGAGAAAGATTGAAGAGTATCGTGAAGTTGGTATGCGTTTGAAAGGATATCCTGAAGAAGATGTTAGAAATGCACGGAAGTTGGTTTCGAGTTTTAT AAGAGCTGAAGAAGAAATTGAACAGAAAATTGAGGAAGCTGCGGAGAAAGGAATACTAACCGAACTTGTTTTAATGGTCATATGGAATCGCTTGGATCTT GCTCGACGTGATAATGAAAAGGATGCTATAAGAAGTCTGGATCTGTTATACCGAAGGGTTGAGGTAACAACTACTCCTTTTATCAGGAGTTCCAGCATTC ATTTCAGCGAGAATTTTATCCCCAACAGTCAACACATGCACAAAGAAGAGGAAAAATATTGAAAGCAATGGTTAAGAAGGATAACGAAAGGGATTGGTTC ATTAAGATGGCCTTGGAGACTTGAATGCTAATACTTTGATGATTTGTCAACAAAAAAATAATAACTTGATGATGACAAACATTGATGCTTCTCTCTAGAA GCAAAAACATGCACAAATAAAAAATAACTTTATACAAAATAATCTCTTTTCAATAGCACTTTTTTGTATACCAACAAAAATTGTATATGGTGGTAAGTGA GCCACACTCCCATGGAGATGACTAAAGTTCAAATTCTGGAGAAGGCAATTATTGGGAGTGCCTCCTAGTCACTACAATGTTCAAGGGTTAGGTTCACAGC AATGTTTGTGAGAATATTGATTAAGACAGAAGTAGACGTAGCACTTTTTTGTAAGTTTTTAAGAGCACAACATTTTCAAAGAATATCGCAGAAAAAGCCA AACGACTATTAGAAGCCAAGTAAGGGCCCCTTGATTTTCTTAGGACCTTGGGATATTTGTTAATAAAATAACTTGTGTTTCTGTAAACAATCTTTGCTAA GTTTAGTGTGTAGGGCATATGATTTTTTGTTTGTTATTTTTTCTGAGTACACTTCTATAGTAATTTGTGGGGGATATATAGACCTTTTTCTTATCTGTCT GTTTAGTTGAATAAACTTTCACAATCATATTGACTTCAATTTAGAACATCTATAGCATATTGCATTCTGCACAGGTTAACTGAAAGTCTGAAACTTAATA TTTATTTTGTTCCTTTTTCTGGGAGTTTTATTTTCTCTTCTTGATTATAGACTGAGATCTTGAAACGGGAGGCTACCCCTGCAATGAGACTGCTCAATGA TCTTTTGATTATGTATGATGGCTTTGATTATGAAGAGTGGCTGAAGAAATGTAAAAAGCGCATGATCGATACATTTCCCCGGGAGGATCCATATAGTATT CTTGTTCCACCAGGATTTGAGTCATTTGACATAGATAAGCTTGAAGGGCCATTGTCACCACCACCTGAACATGATGATACTCTTTTGAGGGTGGACTTTG TAAGGGAGGTGGATGAATTGCTACAAGAGGTTCGCGTTGAACAGAGTGAAGTAGAGAATGAAGCAGGGTTTGATCCCGAATCTGTTGCAAATAGATTGAA ACAACAGGAGAGGCAACAATCAATACGCCAAGTAGAAGCTCTGTTAGACTTAGCCATTGGTCTGAAATGGTAGCTACTTGGCTCATTTTTTATGGCGACA AGATTGGCTTCTGAGTCATGGAAACCCCAACTTGCATTTGATTCATATCCATTATCTCATAGTTTATACTTCATAGTTTAGAGTAGGAATGATTATGTAT GGTAATTGCAATCCAATTTCTGATAGTTGAGTTTTTCTTTTTCTCTAGGTGTGATCTGAATGTACATTTTGGGTGATCCTGTATTTTTAATTCTAGTCCA AAAAAATATCAATGAAAGTCTGAATTGTCTATTTCCTTAGCTAAGTGCAAAGTTAAAATTTCTACACATAAAATTATGGGTCAATGAATGTTTGTATTGA GCTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_176061; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_499017
| Blastp | Protein PALE CRESS, chloroplastic from Arabidopsis with 66.48% of identity |
|---|---|
| Blastx | Protein PALE CRESS, chloroplastic from Arabidopsis with 63.19% of identity |
| Eggnog | NA(ENOG4111FTZ) |
| Kegg | Link to kegg annotations (AT2G48120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452673.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |