| Id Trinity | TRINITY_DN50288_c1_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_499032 |
| Sequence | TGTATGAATCTGTTATATTATTATTATGAAGTAAAATTAAGAAGAAGAAGAAGAAGAATAATAATAAAGGAAGGAGTGCTATGAAATTAAAAATAGTTGG TGCACCTCTATCACTCTTTTCTCACTCTCTCGATCACAATCACAGTCACAGTATGGTGACATTCATGTCCAAGTCGAAGAACCACTCTCACGGTTCTGAA TCTTCAATTCCATCTCCTCCTCCAAGGATTACATCCAATGTCAAGCAAAATCTCCAATTCCTTAAGCTATGGAAGGAGTTCCAAAAACGAAAATCTAGTA GCACTTGTAAGCCCTCAACCAGTTACCGCAGAAAAAAGATTGACAAAGACGATGTGGTTGACCACGACGCTGACCTCTATCGCGATCCCTCTACCACCCT CTACTATACAAACCAGGGTATAGAGAATGCACTTGCAGTCCCTGTATTGCTAGTTGATGGTTATAATGTCTGTGGCTATTGGATCAAGCTCAAGAAGCAT TTCATCAATGGCCATCTTCACATTGCTCGCCACAAGCTTCTTAATGAGCTCGTTACTTTCAGTACTCTCAGAGAGGTCAAAATTGTTGCTGTTTTTGATG CTATGATGTCTGGCCTCCCTTCTCACAAGGAAAACTTTGCTGGTGTCGATGTTATTTTCACATCTGAAACATGTGCTGATACATGGATTGAAAAGGAGGT TGCAGCTTTGAAGGAGGATGGATGCCCCAAAGTCTGGGTTGTCACTTCTGATCACTGTCAACAACATGCAGCACATGGAGCAGGAGCTTTTGTCTGGAGT TGCAAGGCTTTGGTTACAGAGATCAAGGCATCACATAAGGAGGTTGAAATGATGCTTCAAGAGCAAAGATCTACTTCTTTTCAAGGTAGATTACTGAAAC ACAATCTTGATGCTGAAGTTGTGGATGCTCTGAAGAACCTGAGGCAAAAACTATCTAAAAATGAGTTGAAGTAGAATGAATACCAGTCGAAATTCCAGTC ACAATTTATTTTGACAGGTGAACTCTCAGCAACATAAATTTTATTAATTTACCTGGTGTTAGATCCTAGATGTTTTTCATCTTTAGGAAGGTGAGCATGG GTTTATTATTTATAACAGTCATACTCTTTAGTCTTTTACCTTCTGGTTGGTTCATATTTTGAGGTAATGACGAAGAATAAATAAACTACTGCTAATAACA CTGGCTGTGTCACAACCAGAACCGCCTGGACAATGTATTCATTAATACCAACCATCTAAACTATAATGTCTTATAATCAGCTTAGAAGCGATTCTTCATT AAATGTAATATCTATGCATTGTTACTGAAAGATCATACACAATCACTATATTATCCTTCATTCATTTGAATTACTTTCTTTAAAGAGTAATGATGATTAA ATATGAATTTTGGATAATGCAGTGATTGTATATAAAACTCGTCGGTGTATACATTTTTCTCTCTTCATAATTTATATCTTAAGATGTTTGTTCACTGAAA TAGAAGTTGGTAGTTACTTCCCTGAACCCTGTCTTGAGGAACAAGGATCACAAGTAGTTGATTTTCCTTGTAATGGAGAGGATCCTGGAATGAAACAAAG ATGAGAGTCATTTTCCATATGAAACAAAGCCAAACAATGATCCAATTCATTAAACAAAATCCGATCAACAATGAGGAACCCTTAGTTTTCTAGCAAACAA GTAAAATTATGTGTCTCACATAATTTATGCACCTTGCAAAGTTTTATTTCTGGCAGGTGCTTTTGGATGTGGTGGCATTGATTTGGATGAACTACAATGA CTGCTAACGCATGCATGTAGTGAAAGAGAGAGAGAGAGAATGTTTATTGCCAATTTTAATTTGTGCAACTTATTATTATTGTTATTATTAGTATTATTAT TATTATTATTTATCATTATAAGGAAATGTAAAGCAGTGGCCGAACATGGCCTTCTCCATTTGCAACAATCAAGAGATCTTAGCAATATAGTGATTTTACA GTTGATAGTTAAATTACTAATAAGATATGGGACAACACTATTAATTCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_176065; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_499032
| Blastp | Uncharacterized protein YacP from Bacillus with 35.61% of identity |
|---|---|
| Blastx | Uncharacterized protein YacP from Bacillus with 36.79% of identity |
| Eggnog | Tetracycline resistance protein(COG3688) |
| Kegg | Link to kegg annotations (BSU00970) |
| CantataDB | Link to cantataDB annotations (CNT0001054) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463293.1) |
| Pfam | YacP-like NYN domain (PF05991.10) |
| Rfam | - |
| GO | - |