Ll_transcript_496835

• Id Trinity: TRINITY_DN50291_c0_g3_i2
• Name Transcript: Ll_transcript_496835
• Sequence: TTTACAAGAATAGAAAATCTCACAATGACATTAGAATTACTGGATATATATGACATTTGGAAGTTCTGATGTACTCTTGGAAATTGTCTATTTTGTGTGG TTCTTGAAATTTTGTTTTCCATTTTTTCCAGTGTTTAAATTCCTTTCTCTTTAGGTTGTGGTGATTTCTCTGTTTTCGTGACTTGTTACTGTATCCCCAA CTTAGAATATATGTTTTTAAAGATTATATTAGACACAATAGATGATCTAATTAATTGTACTTTATATTCTATTGCAGCCTACACTTCATAAACCTAGTAT AATGGCGCATGTAGTTCGTGTTTTAAAGGGGGAAAAAACAGTACGGATGCACTACGCAAATTGTAGTACTTACAATGCTGATTTTGACGGTGATGAAATT AATGTTCATTTTCCACAAGATGAAATTTCCCGATCTGAAGCCTACAATATTGTGAATGCCAACAATCAGTATGTGAAGCCTACCAGTGGGGATCCAATCA GAGCCTTGATTCAGGATCATATTGTAAGTGCTGCTCTTCTTACAAAAAGGGATACTTTTTTAAGATGTGAGGAGTTCAACCAACTTCTCTACAGTTCTGG TGTATCCATGGCTGGGATTGGCTCTTTCTGTGGCAAATCTGGGAAGAAAGTATTCATGTTAAGTACCGAGAGTGAAATGCTGATGTTTCCTCCAGCAATA TGGAAGCCAGAGCCGCTATGGACAGGAAAACAGGTTATCAGTGCGTTGCTATACTATATCACTAAAGGTTCTCCACCATTTACTGTGGAGAAGAATGCAA AAATCCCCTCTAATTTTTTCAAGACTCGAATCAGTGAGGGAAATAAATGCAGTGAAGATACATCAAGAAAGAAGGACGAGCCTGATGAGGATAAATTGTT GATATATAGAAATGATTTGGTGCGTGGTGTAGTTGATAAGGCTCAATTTGGTGACTATGGTATGGTGCATACAGTGCAAGAGCTTTATGGCTCAAATGTT GCTGGCAATCTGCTTTCAGCATTAAGTCGTTTATTCACTAACTTTTTACAGATGCATGGGTTCACATGTGGAGTAGATGATCTTCTGATAACAGAAGAAA AGGATGGTGAAAGAATGGCACAACTTGAAAGCTGCGAGGAAATTGGTGACATTGTTCATCGTGAATTTGTTGGGGTCATGGATAATGCTAGATTAGACCC AATCACACTGCAGTTGAATATTGAGAAAAAAATACGCAGTAATGGAGAAGCAGCATTAACATACTTAGATAGGAAGATGATAAGTAATCTTAACACCAGG ACAAGCTCAGGCATATTAAAGGAGTTACTATCTGAAGGAATATTGAAATCCTCTGGAAAAAATTGGATTTCTCTCATGACTACATCCGGAGCTAAGGGTA GTATGGTCAATTTTCAGCAAATCTCGTCTCATCTAGGCCAGCAAGAGTTGGAAGGAAAACGAGTTCCACGCATGGTTTCTGGAAAGACCTTGCCATGCTT TACTCCCTGGGATTGTTCTCCTAGAGCAGGAGGGTTCATTATAGATCGTTTTCTCACTGCCCTTCGCCCACAGGAATATTATTTTCATTGCATGGCTGGT CGTGAAGGATTAGTTGATACTGCAGTCAAAACATCTCGGAGTGGTTACCTACAAAGATGCCTAATGAAAAATCTTGAGTGTCTTAAAGTTAGTTATGATC ATACTGTTCGTGATTCTGATGGTTCGGTTATCCAGTTTCACTATGGAGAAGATGGTGTAGATGTCCATCAAACTAGCTTTATCACCAAGTTTGAAGCATT GTCAACTAATAAAGAATTGGTTAATAGCAACTTTTGTCGTCAGCTAGACAAATCCAGTCCTTACATTAACAAGTTGCCTGATGCTCTTGAAAGAAAAGCA AAAAAATTCATTCGTGAGAAACAGAGAAACACTGGTTCAATAAAACGATCAGACTTCTTGAAGTTGATGGAGCACAAGTATATTTCGAGTCTTGCACAGC CTGGAGAGCCAGTTGGTGTGTTAGCTTCTCAGTCTGTTGGAGAACCAGCAACACAGATGACTTTGAATACGTTCCATCTTGCTGGTCGTGGTGAAATGAA TGTGACACTTGGAATTCCACGTCTACAAGAGATCCTAATGGCTGCCGCAAGAGATATCAAGACTCCATTTATGTCATGCCCCTTGACCTTGATACCTGAA AAATCAATGGAAGATGCAATTCGTCTTGCAGATAAGTTGAAGAAGATCACCGTAGCTGACATAATTGAGAATATGGAAGTGTCTGTTGTACCAGTAGCTG TTCTTGATGGTCAGATTTGCAGTATATATAAGCTTGAGATGAAGCTATACAAGCCTAAACACTATCCAAAGTACACTGATATAACAATTGCAGACTGGGA GGAAACTCTAAGCGTTGTTTTTGTGAGGGAGTTGGAGGATGCCATTGAGAATCACATGTCATTGCTCTCTAAGATTAGTGGCATACAAAATTTTAAGTCT GATCCACAATCAAGTTCTTCAAATGGTTCAGAAGACGTTGACAGCAATGGATTGGAATCTGAGAAAAAGGGTCACAATAATGACGAGGACGATGAAGATG GTGGTGAAGATACAGAAGGGGCTGACGATCTTGGTTCAGATGCTCAAAAGCGAAAACAGCAAGGTACTGATGAGGTTGATTACGAGGATGGTGCTGAAGA GGACACACATGACGGTGAGCTATCAGAGGATTTCGAAGATGACGAGGGTGTGGGTGATGTAAAAGTTAACGAGGATGGGCGTCATGTCATAGTTAACGAT AATGATAGTGATATTGAATTTAGTGAGGGTGGTGAGAATGTGCCAAATGATGCCAATAATTCTCATGAACATGGAATGCAATCCAAGCCGAAGTCTACTA ATGAAAAGAATAATTTGGAATCTGGAAAGAAAAAATCTGAATCAACAACAAAAAAATTTGACAGGCGATTTTTTGTTGAAGCGAAAGGGATGAATTTTAA GATCCACTTTAAATTTATCAATGAACCTCACATTTTGTTGGCTCAGATTGCTCAGAAATCTGCTAAGAAGGTTTGCATCCAGAAGTTTGGAAAGGTTGGC GAATGTAAAGCTATTACATGCAAAGAAAGTGGAGTACTCTACAATGGTGAAGATGAAGGTAAGAAGGATGCAGAGAAAATACCAGCACTTCAGACATCAG GGATACATTTCCAAACATTCTGGGAGTTGCAAGATGATCTTGATGTTAACTATGTTTATTCAAACAACGTCTCCGAAATGCTAAATGCTTATGGGGTGGA AGCAGCCAGAGAGACCATCATAAGGGAAGTACAAAATGTGTTCAAGTCTTATGGGATATCAGTAAATATCCGGCATTTGACGCTTATTGCGGACTTTATG ACACACTCCGGTAGCTATCGTCCAATGAGCAGAATGGGTAGCATAGCGGACTCCACATCCCCTTTCATCAAAATGTGCTTTGAGACAGCCTCCAAATTCA TTGTTGAAGCAGCTTATCATGGACAAGTGGACACATTGGAAACTCCTTCAGCTAGAGTTTGCCTTGGTTTACCAGTAAAAATGGGAACTGGGTGCCATGA GCTGATCCAGAAGGTGGAAATATGATATAGCTGCCATGTTCCTCAGCTCAGACCTGTGGCAAGATTTTGACACATTACACAACAAAGTTTTGTTTGAAAA AATTAAATTGTCTTGGAGGTAGTGGTATTATTATTGTATTAAATGCCATGCCTGGTGCAATATACAAGTGGTAGAAAGAATAGCTTCTTGTTCCTGTGCC ATTTTCCTGATTATTTTAATATATTGTATAACATATTGACATGTAATTTTATTTCAATGTTTTTACTTAGCTTTGATGATTTAAAGTATACTTTGTGGAT GACCTTATTTAAGTTGTATGCAATTACCCATTTTCATAAATTATACATTATTTTCT
• Tissue: pods
• Gene name: LI_gene_176089;
• Additional information: details;

Expression of Ll_transcript_496835

FPKM

• PAB: 0.1
• PNAB: 2
• PS1: 1.9
• PS2: 2.6
• PS3: 2.3
• PW1: 1.3
• PW2: 1.7
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_496835

• Blastp: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 57.82% of identity
• Blastx: DNA-directed RNA polymerase I subunit 1 from Arabidopsis with 58.61% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT3G57660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421167.1)
• Pfam: RNA polymerase Rpb1, domain 2 (PF00623.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;